Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SND1-IT1Q9HBX3 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SND1-IT1Q9HBX3 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SND1-IT1Q9HBX3 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SND1-IT1Q9HBX3 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
SND1-IT1Q9HBX3 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SND1-IT1Q9HBX3 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SND1-IT1Q9HBX3 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
SND1-IT1Q9HBX3 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SND1-IT1Q9HBX3 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC11.99□□□□□ -0.49
SND1-IT1Q9HBX3 AC004951.3-201ENST00000418645 1148 ntBASIC11.99□□□□□ -0.49
SND1-IT1Q9HBX3 NIFKP9-201ENST00000419265 221 ntBASIC11.99□□□□□ -0.49
SND1-IT1Q9HBX3 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC11.99□□□□□ -0.49
SND1-IT1Q9HBX3 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC11.99□□□□□ -0.49
SND1-IT1Q9HBX3 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC11.99□□□□□ -0.49
SND1-IT1Q9HBX3 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC11.99□□□□□ -0.49
SND1-IT1Q9HBX3 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC11.99□□□□□ -0.49
SND1-IT1Q9HBX3 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC11.99□□□□□ -0.49
SND1-IT1Q9HBX3 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
SND1-IT1Q9HBX3 AC008403.3-201ENST00000598924 454 ntBASIC11.99□□□□□ -0.49
SND1-IT1Q9HBX3 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SND1-IT1Q9HBX3 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SND1-IT1Q9HBX3 AL109923.1-201ENST00000618799 583 ntBASIC11.99□□□□□ -0.49
SND1-IT1Q9HBX3 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC11.99□□□□□ -0.49
SND1-IT1Q9HBX3 AL023875.1-201ENST00000640777 796 ntBASIC11.99□□□□□ -0.49
SND1-IT1Q9HBX3 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
SND1-IT1Q9HBX3 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SND1-IT1Q9HBX3 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
SND1-IT1Q9HBX3 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC11.99□□□□□ -0.49
SND1-IT1Q9HBX3 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
SND1-IT1Q9HBX3 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
SND1-IT1Q9HBX3 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
SND1-IT1Q9HBX3 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
SND1-IT1Q9HBX3 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC11.99□□□□□ -0.49
SND1-IT1Q9HBX3 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
SND1-IT1Q9HBX3 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SND1-IT1Q9HBX3 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC11.99□□□□□ -0.49
SND1-IT1Q9HBX3 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
SND1-IT1Q9HBX3 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SND1-IT1Q9HBX3 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
SND1-IT1Q9HBX3 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC11.99□□□□□ -0.49
SND1-IT1Q9HBX3 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SND1-IT1Q9HBX3 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SND1-IT1Q9HBX3 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC11.99□□□□□ -0.49
SND1-IT1Q9HBX3 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SND1-IT1Q9HBX3 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SND1-IT1Q9HBX3 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
SND1-IT1Q9HBX3 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC11.99□□□□□ -0.49
SND1-IT1Q9HBX3 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC11.99□□□□□ -0.49
SND1-IT1Q9HBX3 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SND1-IT1Q9HBX3 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC11.98□□□□□ -0.49
SND1-IT1Q9HBX3 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SND1-IT1Q9HBX3 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
SND1-IT1Q9HBX3 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SND1-IT1Q9HBX3 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SND1-IT1Q9HBX3 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC11.98□□□□□ -0.49
SND1-IT1Q9HBX3 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC11.98□□□□□ -0.49
SND1-IT1Q9HBX3 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SND1-IT1Q9HBX3 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SND1-IT1Q9HBX3 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC11.98□□□□□ -0.49
SND1-IT1Q9HBX3 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SND1-IT1Q9HBX3 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SND1-IT1Q9HBX3 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC11.98□□□□□ -0.49
SND1-IT1Q9HBX3 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
SND1-IT1Q9HBX3 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
SND1-IT1Q9HBX3 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC11.98□□□□□ -0.49
SND1-IT1Q9HBX3 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC11.98□□□□□ -0.49
SND1-IT1Q9HBX3 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC11.98□□□□□ -0.49
SND1-IT1Q9HBX3 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SND1-IT1Q9HBX3 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SND1-IT1Q9HBX3 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC11.98□□□□□ -0.49
SND1-IT1Q9HBX3 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SND1-IT1Q9HBX3 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SND1-IT1Q9HBX3 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
SND1-IT1Q9HBX3 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC11.98□□□□□ -0.49
SND1-IT1Q9HBX3 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC11.98□□□□□ -0.49
SND1-IT1Q9HBX3 AP003097.1-201ENST00000530657 1135 ntBASIC11.98□□□□□ -0.49
SND1-IT1Q9HBX3 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC11.98□□□□□ -0.49
SND1-IT1Q9HBX3 CKBP1-201ENST00000565489 1086 ntBASIC11.98□□□□□ -0.49
SND1-IT1Q9HBX3 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
SND1-IT1Q9HBX3 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SND1-IT1Q9HBX3 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
SND1-IT1Q9HBX3 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SND1-IT1Q9HBX3 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC11.98□□□□□ -0.49
SND1-IT1Q9HBX3 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
SND1-IT1Q9HBX3 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SND1-IT1Q9HBX3 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SND1-IT1Q9HBX3 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
SND1-IT1Q9HBX3 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SND1-IT1Q9HBX3 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
SND1-IT1Q9HBX3 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
SND1-IT1Q9HBX3 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SND1-IT1Q9HBX3 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC11.98□□□□□ -0.49
SND1-IT1Q9HBX3 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
SND1-IT1Q9HBX3 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
SND1-IT1Q9HBX3 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC11.98□□□□□ -0.49
SND1-IT1Q9HBX3 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
SND1-IT1Q9HBX3 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SND1-IT1Q9HBX3 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC11.97□□□□□ -0.49
SND1-IT1Q9HBX3 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms