Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL25A1Q9BXS0 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
COL25A1Q9BXS0 HIST1H2BPS3-201ENST00000419683 341 ntBASIC17.87■□□□□ 0.45
COL25A1Q9BXS0 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC17.87■□□□□ 0.45
COL25A1Q9BXS0 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC17.87■□□□□ 0.45
COL25A1Q9BXS0 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC17.87■□□□□ 0.45
COL25A1Q9BXS0 LDHBP1-201ENST00000455730 1119 ntBASIC17.87■□□□□ 0.45
COL25A1Q9BXS0 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC17.87■□□□□ 0.45
COL25A1Q9BXS0 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.87■□□□□ 0.45
COL25A1Q9BXS0 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL25A1Q9BXS0 ALG1L8P-201ENST00000533887 760 ntBASIC17.87■□□□□ 0.45
COL25A1Q9BXS0 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC17.87■□□□□ 0.45
COL25A1Q9BXS0 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC17.87■□□□□ 0.45
COL25A1Q9BXS0 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC17.87■□□□□ 0.45
COL25A1Q9BXS0 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.87■□□□□ 0.45
COL25A1Q9BXS0 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL25A1Q9BXS0 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL25A1Q9BXS0 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL25A1Q9BXS0 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL25A1Q9BXS0 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
COL25A1Q9BXS0 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL25A1Q9BXS0 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
COL25A1Q9BXS0 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC17.87■□□□□ 0.45
COL25A1Q9BXS0 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC17.87■□□□□ 0.45
COL25A1Q9BXS0 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL25A1Q9BXS0 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL25A1Q9BXS0 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.87■□□□□ 0.45
COL25A1Q9BXS0 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL25A1Q9BXS0 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL25A1Q9BXS0 AC132938.5-201ENST00000624980 1813 ntBASIC17.86■□□□□ 0.45
COL25A1Q9BXS0 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
COL25A1Q9BXS0 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL25A1Q9BXS0 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL25A1Q9BXS0 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
COL25A1Q9BXS0 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL25A1Q9BXS0 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL25A1Q9BXS0 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
COL25A1Q9BXS0 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL25A1Q9BXS0 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL25A1Q9BXS0 BRWD1P1-201ENST00000401091 371 ntBASIC17.86■□□□□ 0.45
COL25A1Q9BXS0 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.86■□□□□ 0.45
COL25A1Q9BXS0 AC253536.4-201ENST00000440539 267 ntBASIC17.86■□□□□ 0.45
COL25A1Q9BXS0 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL25A1Q9BXS0 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC17.86■□□□□ 0.45
COL25A1Q9BXS0 KRT18P41-201ENST00000518924 1277 ntBASIC17.86■□□□□ 0.45
COL25A1Q9BXS0 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.86■□□□□ 0.45
COL25A1Q9BXS0 STOM-203ENST00000538954 1257 ntTSL 5 BASIC17.86■□□□□ 0.45
COL25A1Q9BXS0 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.86■□□□□ 0.45
COL25A1Q9BXS0 ORC6-206ENST00000568364 888 ntTSL 5 BASIC17.86■□□□□ 0.45
COL25A1Q9BXS0 MIR3615-201ENST00000581999 87 ntBASIC17.86■□□□□ 0.45
COL25A1Q9BXS0 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.86■□□□□ 0.45
COL25A1Q9BXS0 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL25A1Q9BXS0 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL25A1Q9BXS0 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.86■□□□□ 0.45
COL25A1Q9BXS0 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
COL25A1Q9BXS0 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL25A1Q9BXS0 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL25A1Q9BXS0 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
COL25A1Q9BXS0 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL25A1Q9BXS0 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
COL25A1Q9BXS0 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL25A1Q9BXS0 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL25A1Q9BXS0 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
COL25A1Q9BXS0 NSL1-201ENST00000366976 722 ntTSL 2 BASIC17.85■□□□□ 0.45
COL25A1Q9BXS0 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL25A1Q9BXS0 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
COL25A1Q9BXS0 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC17.85■□□□□ 0.45
COL25A1Q9BXS0 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC17.85■□□□□ 0.45
COL25A1Q9BXS0 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL25A1Q9BXS0 LY6E-204ENST00000519546 971 ntTSL 2 BASIC17.85■□□□□ 0.45
COL25A1Q9BXS0 FADS2-212ENST00000522639 360 ntTSL 5 BASIC17.85■□□□□ 0.45
COL25A1Q9BXS0 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
COL25A1Q9BXS0 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.85■□□□□ 0.45
COL25A1Q9BXS0 AC079328.1-201ENST00000560358 952 ntBASIC17.85■□□□□ 0.45
COL25A1Q9BXS0 MPI-209ENST00000564003 1195 ntTSL 2 BASIC17.85■□□□□ 0.45
COL25A1Q9BXS0 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.85■□□□□ 0.45
COL25A1Q9BXS0 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.85■□□□□ 0.45
COL25A1Q9BXS0 FADS2-215ENST00000574708 385 ntTSL 3 BASIC17.85■□□□□ 0.45
COL25A1Q9BXS0 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.85■□□□□ 0.45
COL25A1Q9BXS0 AC008494.3-201ENST00000606615 944 ntBASIC17.85■□□□□ 0.45
COL25A1Q9BXS0 AC008738.7-201ENST00000609744 511 ntBASIC17.85■□□□□ 0.45
COL25A1Q9BXS0 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.85■□□□□ 0.45
COL25A1Q9BXS0 TEX21P-204ENST00000641479 1693 ntBASIC17.85■□□□□ 0.45
COL25A1Q9BXS0 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC17.85■□□□□ 0.45
COL25A1Q9BXS0 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL25A1Q9BXS0 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
COL25A1Q9BXS0 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL25A1Q9BXS0 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
COL25A1Q9BXS0 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL25A1Q9BXS0 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.84■□□□□ 0.45
COL25A1Q9BXS0 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL25A1Q9BXS0 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.84■□□□□ 0.45
COL25A1Q9BXS0 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
COL25A1Q9BXS0 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
COL25A1Q9BXS0 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
COL25A1Q9BXS0 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL25A1Q9BXS0 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL25A1Q9BXS0 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
COL25A1Q9BXS0 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC17.84■□□□□ 0.45
COL25A1Q9BXS0 AC009477.1-201ENST00000452936 217 ntBASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms