Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 PCDHB18P-201ENST00000524813 2368 ntBASIC17.57■□□□□ 0.4
CCM2Q9BSQ5 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCM2Q9BSQ5 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCM2Q9BSQ5 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCM2Q9BSQ5 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCM2Q9BSQ5 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCM2Q9BSQ5 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CCM2Q9BSQ5 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.57■□□□□ 0.4
CCM2Q9BSQ5 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCM2Q9BSQ5 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.57■□□□□ 0.4
CCM2Q9BSQ5 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.57■□□□□ 0.4
CCM2Q9BSQ5 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CCM2Q9BSQ5 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCM2Q9BSQ5 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCM2Q9BSQ5 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCM2Q9BSQ5 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCM2Q9BSQ5 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCM2Q9BSQ5 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCM2Q9BSQ5 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
CCM2Q9BSQ5 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.57■□□□□ 0.4
CCM2Q9BSQ5 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCM2Q9BSQ5 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCM2Q9BSQ5 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCM2Q9BSQ5 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCM2Q9BSQ5 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.56■□□□□ 0.4
CCM2Q9BSQ5 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCM2Q9BSQ5 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCM2Q9BSQ5 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CCM2Q9BSQ5 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCM2Q9BSQ5 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCM2Q9BSQ5 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.56■□□□□ 0.4
CCM2Q9BSQ5 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.56■□□□□ 0.4
CCM2Q9BSQ5 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCM2Q9BSQ5 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCM2Q9BSQ5 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.56■□□□□ 0.4
CCM2Q9BSQ5 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
CCM2Q9BSQ5 AC012615.1-201ENST00000565797 1299 ntBASIC17.56■□□□□ 0.4
CCM2Q9BSQ5 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.56■□□□□ 0.4
CCM2Q9BSQ5 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.56■□□□□ 0.4
CCM2Q9BSQ5 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.56■□□□□ 0.4
CCM2Q9BSQ5 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.56■□□□□ 0.4
CCM2Q9BSQ5 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CCM2Q9BSQ5 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CCM2Q9BSQ5 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CCM2Q9BSQ5 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCM2Q9BSQ5 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCM2Q9BSQ5 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.56■□□□□ 0.4
CCM2Q9BSQ5 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.56■□□□□ 0.4
CCM2Q9BSQ5 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCM2Q9BSQ5 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCM2Q9BSQ5 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCM2Q9BSQ5 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCM2Q9BSQ5 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.55■□□□□ 0.4
CCM2Q9BSQ5 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCM2Q9BSQ5 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCM2Q9BSQ5 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.55■□□□□ 0.4
CCM2Q9BSQ5 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCM2Q9BSQ5 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CCM2Q9BSQ5 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCM2Q9BSQ5 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCM2Q9BSQ5 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCM2Q9BSQ5 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCM2Q9BSQ5 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.55■□□□□ 0.4
CCM2Q9BSQ5 KRT17P6-201ENST00000453795 1220 ntBASIC17.55■□□□□ 0.4
CCM2Q9BSQ5 AC091607.1-201ENST00000490318 1060 ntBASIC17.55■□□□□ 0.4
CCM2Q9BSQ5 AP000867.3-201ENST00000524675 377 ntBASIC17.55■□□□□ 0.4
CCM2Q9BSQ5 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCM2Q9BSQ5 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.55■□□□□ 0.4
CCM2Q9BSQ5 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.55■□□□□ 0.4
CCM2Q9BSQ5 MIR3652-201ENST00000579335 131 ntBASIC17.55■□□□□ 0.4
CCM2Q9BSQ5 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
CCM2Q9BSQ5 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.55■□□□□ 0.4
CCM2Q9BSQ5 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.55■□□□□ 0.4
CCM2Q9BSQ5 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.55■□□□□ 0.4
CCM2Q9BSQ5 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
CCM2Q9BSQ5 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCM2Q9BSQ5 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCM2Q9BSQ5 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.55■□□□□ 0.4
CCM2Q9BSQ5 AC008764.6-201ENST00000595909 2069 ntBASIC17.55■□□□□ 0.4
CCM2Q9BSQ5 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCM2Q9BSQ5 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCM2Q9BSQ5 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCM2Q9BSQ5 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCM2Q9BSQ5 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCM2Q9BSQ5 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.55■□□□□ 0.4
CCM2Q9BSQ5 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.55■□□□□ 0.4
CCM2Q9BSQ5 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
CCM2Q9BSQ5 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCM2Q9BSQ5 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCM2Q9BSQ5 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCM2Q9BSQ5 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CCM2Q9BSQ5 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
CCM2Q9BSQ5 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CCM2Q9BSQ5 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCM2Q9BSQ5 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCM2Q9BSQ5 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCM2Q9BSQ5 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCM2Q9BSQ5 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCM2Q9BSQ5 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCM2Q9BSQ5 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms