Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.34■□□□□ 0.85
ARID3AQ99856 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.34■□□□□ 0.85
ARID3AQ99856 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ARID3AQ99856 AL118508.1-201ENST00000613502 2345 ntBASIC20.34■□□□□ 0.85
ARID3AQ99856 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.34■□□□□ 0.85
ARID3AQ99856 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC20.34■□□□□ 0.85
ARID3AQ99856 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ARID3AQ99856 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
ARID3AQ99856 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ARID3AQ99856 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
ARID3AQ99856 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ARID3AQ99856 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
ARID3AQ99856 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
ARID3AQ99856 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ARID3AQ99856 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
ARID3AQ99856 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
ARID3AQ99856 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ARID3AQ99856 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
ARID3AQ99856 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC20.33■□□□□ 0.85
ARID3AQ99856 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ARID3AQ99856 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ARID3AQ99856 AC092850.2-201ENST00000623821 2697 ntBASIC20.33■□□□□ 0.85
ARID3AQ99856 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ARID3AQ99856 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
ARID3AQ99856 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.85
ARID3AQ99856 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
ARID3AQ99856 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
ARID3AQ99856 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ARID3AQ99856 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ARID3AQ99856 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
ARID3AQ99856 CRYGFP-201ENST00000418459 633 ntBASIC20.33■□□□□ 0.85
ARID3AQ99856 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ARID3AQ99856 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.33■□□□□ 0.85
ARID3AQ99856 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.33■□□□□ 0.85
ARID3AQ99856 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
ARID3AQ99856 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
ARID3AQ99856 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC20.33■□□□□ 0.84
ARID3AQ99856 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ARID3AQ99856 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ARID3AQ99856 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
ARID3AQ99856 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ARID3AQ99856 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
ARID3AQ99856 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
ARID3AQ99856 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ARID3AQ99856 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
ARID3AQ99856 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ARID3AQ99856 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ARID3AQ99856 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
ARID3AQ99856 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.32■□□□□ 0.84
ARID3AQ99856 KRT17P2-201ENST00000300992 1314 ntBASIC20.32■□□□□ 0.84
ARID3AQ99856 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC20.32■□□□□ 0.84
ARID3AQ99856 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ARID3AQ99856 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ARID3AQ99856 UNC93B2-201ENST00000285383 730 ntBASIC20.32■□□□□ 0.84
ARID3AQ99856 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ARID3AQ99856 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.32■□□□□ 0.84
ARID3AQ99856 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.32■□□□□ 0.84
ARID3AQ99856 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC20.32■□□□□ 0.84
ARID3AQ99856 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ARID3AQ99856 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.32■□□□□ 0.84
ARID3AQ99856 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ARID3AQ99856 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
ARID3AQ99856 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC20.32■□□□□ 0.84
ARID3AQ99856 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
ARID3AQ99856 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ARID3AQ99856 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.31■□□□□ 0.84
ARID3AQ99856 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ARID3AQ99856 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ARID3AQ99856 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.31■□□□□ 0.84
ARID3AQ99856 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC20.31■□□□□ 0.84
ARID3AQ99856 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ARID3AQ99856 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
ARID3AQ99856 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ARID3AQ99856 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ARID3AQ99856 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ARID3AQ99856 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ARID3AQ99856 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
ARID3AQ99856 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
ARID3AQ99856 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.31■□□□□ 0.84
ARID3AQ99856 LINC02199-201ENST00000506655 2702 ntBASIC20.31■□□□□ 0.84
ARID3AQ99856 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ARID3AQ99856 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ARID3AQ99856 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ARID3AQ99856 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ARID3AQ99856 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ARID3AQ99856 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ARID3AQ99856 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ARID3AQ99856 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC20.31■□□□□ 0.84
ARID3AQ99856 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC20.31■□□□□ 0.84
ARID3AQ99856 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ARID3AQ99856 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
ARID3AQ99856 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ARID3AQ99856 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.3■□□□□ 0.84
ARID3AQ99856 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC20.3■□□□□ 0.84
ARID3AQ99856 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
ARID3AQ99856 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
ARID3AQ99856 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ARID3AQ99856 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
ARID3AQ99856 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ARID3AQ99856 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms