Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.86■□□□□ 0.45
CPNE1Q99829 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.86■□□□□ 0.45
CPNE1Q99829 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CPNE1Q99829 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CPNE1Q99829 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.86■□□□□ 0.45
CPNE1Q99829 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CPNE1Q99829 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
CPNE1Q99829 REXO1L11P-201ENST00000620964 1927 ntBASIC17.86■□□□□ 0.45
CPNE1Q99829 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CPNE1Q99829 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CPNE1Q99829 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CPNE1Q99829 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CPNE1Q99829 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.86■□□□□ 0.45
CPNE1Q99829 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CPNE1Q99829 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.85■□□□□ 0.45
CPNE1Q99829 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CPNE1Q99829 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CPNE1Q99829 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CPNE1Q99829 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CPNE1Q99829 PKD1P1-201ENST00000458669 6805 ntBASIC17.85■□□□□ 0.45
CPNE1Q99829 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CPNE1Q99829 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CPNE1Q99829 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
CPNE1Q99829 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CPNE1Q99829 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
CPNE1Q99829 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CPNE1Q99829 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.85■□□□□ 0.45
CPNE1Q99829 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.85■□□□□ 0.45
CPNE1Q99829 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CPNE1Q99829 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CPNE1Q99829 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CPNE1Q99829 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CPNE1Q99829 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CPNE1Q99829 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.85■□□□□ 0.45
CPNE1Q99829 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CPNE1Q99829 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.85■□□□□ 0.45
CPNE1Q99829 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.85■□□□□ 0.45
CPNE1Q99829 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CPNE1Q99829 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.85■□□□□ 0.45
CPNE1Q99829 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CPNE1Q99829 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.85■□□□□ 0.45
CPNE1Q99829 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CPNE1Q99829 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
CPNE1Q99829 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
CPNE1Q99829 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CPNE1Q99829 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CPNE1Q99829 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.84■□□□□ 0.45
CPNE1Q99829 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.84■□□□□ 0.45
CPNE1Q99829 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.84■□□□□ 0.45
CPNE1Q99829 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CPNE1Q99829 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CPNE1Q99829 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.84■□□□□ 0.45
CPNE1Q99829 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.84■□□□□ 0.45
CPNE1Q99829 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.84■□□□□ 0.45
CPNE1Q99829 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
CPNE1Q99829 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.84■□□□□ 0.45
CPNE1Q99829 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CPNE1Q99829 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CPNE1Q99829 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.84■□□□□ 0.45
CPNE1Q99829 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.84■□□□□ 0.45
CPNE1Q99829 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.84■□□□□ 0.45
CPNE1Q99829 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CPNE1Q99829 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CPNE1Q99829 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.84■□□□□ 0.45
CPNE1Q99829 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CPNE1Q99829 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.84■□□□□ 0.45
CPNE1Q99829 AL138966.2-201ENST00000621997 464 ntBASIC17.84■□□□□ 0.45
CPNE1Q99829 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CPNE1Q99829 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CPNE1Q99829 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CPNE1Q99829 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CPNE1Q99829 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CPNE1Q99829 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CPNE1Q99829 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CPNE1Q99829 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CPNE1Q99829 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CPNE1Q99829 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CPNE1Q99829 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.83■□□□□ 0.45
CPNE1Q99829 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CPNE1Q99829 AC012313.1-201ENST00000593393 3059 ntBASIC17.83■□□□□ 0.45
CPNE1Q99829 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CPNE1Q99829 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CPNE1Q99829 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CPNE1Q99829 KRT8P47-201ENST00000604727 1398 ntBASIC17.83■□□□□ 0.45
CPNE1Q99829 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.83■□□□□ 0.45
CPNE1Q99829 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
CPNE1Q99829 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
CPNE1Q99829 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CPNE1Q99829 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.83■□□□□ 0.44
CPNE1Q99829 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CPNE1Q99829 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CPNE1Q99829 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
CPNE1Q99829 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.83■□□□□ 0.44
CPNE1Q99829 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CPNE1Q99829 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CPNE1Q99829 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
CPNE1Q99829 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
CPNE1Q99829 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CPNE1Q99829 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CPNE1Q99829 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms