Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NPAS2Q99743 RNF152P1-201ENST00000397754 604 ntBASIC17.5■□□□□ 0.39
NPAS2Q99743 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NPAS2Q99743 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.5■□□□□ 0.39
NPAS2Q99743 AL441883.1-201ENST00000566170 1045 ntBASIC17.5■□□□□ 0.39
NPAS2Q99743 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.5■□□□□ 0.39
NPAS2Q99743 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
NPAS2Q99743 AL023973.1-201ENST00000624619 620 ntBASIC17.5■□□□□ 0.39
NPAS2Q99743 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NPAS2Q99743 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NPAS2Q99743 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NPAS2Q99743 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
NPAS2Q99743 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
NPAS2Q99743 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
NPAS2Q99743 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
NPAS2Q99743 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
NPAS2Q99743 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.5■□□□□ 0.39
NPAS2Q99743 AP001094.4-201ENST00000579008 2176 ntBASIC17.5■□□□□ 0.39
NPAS2Q99743 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NPAS2Q99743 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.5■□□□□ 0.39
NPAS2Q99743 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
NPAS2Q99743 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
NPAS2Q99743 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.5■□□□□ 0.39
NPAS2Q99743 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NPAS2Q99743 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
NPAS2Q99743 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
NPAS2Q99743 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
NPAS2Q99743 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NPAS2Q99743 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
NPAS2Q99743 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
NPAS2Q99743 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
NPAS2Q99743 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
NPAS2Q99743 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NPAS2Q99743 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.49■□□□□ 0.39
NPAS2Q99743 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.49■□□□□ 0.39
NPAS2Q99743 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NPAS2Q99743 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NPAS2Q99743 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
NPAS2Q99743 FAM8A6P-201ENST00000407496 1135 ntBASIC17.49■□□□□ 0.39
NPAS2Q99743 TSPY5P-201ENST00000426936 936 ntBASIC17.49■□□□□ 0.39
NPAS2Q99743 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
NPAS2Q99743 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.49■□□□□ 0.39
NPAS2Q99743 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.49■□□□□ 0.39
NPAS2Q99743 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.49■□□□□ 0.39
NPAS2Q99743 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NPAS2Q99743 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.49■□□□□ 0.39
NPAS2Q99743 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
NPAS2Q99743 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.49■□□□□ 0.39
NPAS2Q99743 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NPAS2Q99743 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
NPAS2Q99743 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.49■□□□□ 0.39
NPAS2Q99743 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NPAS2Q99743 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NPAS2Q99743 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NPAS2Q99743 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.48■□□□□ 0.39
NPAS2Q99743 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPAS2Q99743 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPAS2Q99743 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPAS2Q99743 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.48■□□□□ 0.39
NPAS2Q99743 NKILA-202ENST00000614771 2598 ntBASIC17.48■□□□□ 0.39
NPAS2Q99743 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPAS2Q99743 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPAS2Q99743 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.48■□□□□ 0.39
NPAS2Q99743 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPAS2Q99743 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.48■□□□□ 0.39
NPAS2Q99743 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NPAS2Q99743 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPAS2Q99743 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.48■□□□□ 0.39
NPAS2Q99743 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.48■□□□□ 0.39
NPAS2Q99743 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.48■□□□□ 0.39
NPAS2Q99743 AL512604.3-201ENST00000569583 964 ntBASIC17.48■□□□□ 0.39
NPAS2Q99743 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
NPAS2Q99743 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPAS2Q99743 AC011676.5-201ENST00000624864 2660 ntBASIC17.48■□□□□ 0.39
NPAS2Q99743 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NPAS2Q99743 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPAS2Q99743 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
NPAS2Q99743 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPAS2Q99743 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.48■□□□□ 0.39
NPAS2Q99743 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPAS2Q99743 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPAS2Q99743 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPAS2Q99743 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.48■□□□□ 0.39
NPAS2Q99743 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPAS2Q99743 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPAS2Q99743 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPAS2Q99743 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NPAS2Q99743 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.48■□□□□ 0.39
NPAS2Q99743 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPAS2Q99743 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NPAS2Q99743 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.47■□□□□ 0.39
NPAS2Q99743 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPAS2Q99743 KRT18P55-202ENST00000578578 1546 ntBASIC17.47■□□□□ 0.39
NPAS2Q99743 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPAS2Q99743 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
NPAS2Q99743 SDHAP2-201ENST00000455183 2001 ntBASIC17.47■□□□□ 0.39
NPAS2Q99743 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.47■□□□□ 0.39
NPAS2Q99743 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
NPAS2Q99743 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPAS2Q99743 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms