Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAD9AQ99638 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAD9AQ99638 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAD9AQ99638 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
RAD9AQ99638 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RAD9AQ99638 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
RAD9AQ99638 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.96■□□□□ 0.63
RAD9AQ99638 BCAR1-209ENST00000546196 1340 ntBASIC18.96■□□□□ 0.63
RAD9AQ99638 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
RAD9AQ99638 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAD9AQ99638 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.95■□□□□ 0.62
RAD9AQ99638 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
RAD9AQ99638 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAD9AQ99638 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.95■□□□□ 0.62
RAD9AQ99638 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAD9AQ99638 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAD9AQ99638 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RAD9AQ99638 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RAD9AQ99638 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
RAD9AQ99638 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAD9AQ99638 AC003669.1-201ENST00000334569 611 ntBASIC18.95■□□□□ 0.62
RAD9AQ99638 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAD9AQ99638 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.95■□□□□ 0.62
RAD9AQ99638 KLF4P1-201ENST00000412782 1185 ntBASIC18.95■□□□□ 0.62
RAD9AQ99638 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC18.95■□□□□ 0.62
RAD9AQ99638 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.95■□□□□ 0.62
RAD9AQ99638 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
RAD9AQ99638 RNF34-208ENST00000555076 593 ntTSL 3 BASIC18.95■□□□□ 0.62
RAD9AQ99638 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC18.95■□□□□ 0.62
RAD9AQ99638 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
RAD9AQ99638 AC010507.1-201ENST00000633895 436 ntBASIC18.95■□□□□ 0.62
RAD9AQ99638 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.95■□□□□ 0.62
RAD9AQ99638 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.95■□□□□ 0.62
RAD9AQ99638 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAD9AQ99638 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAD9AQ99638 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.95■□□□□ 0.62
RAD9AQ99638 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
RAD9AQ99638 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RAD9AQ99638 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RAD9AQ99638 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAD9AQ99638 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAD9AQ99638 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.95■□□□□ 0.62
RAD9AQ99638 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAD9AQ99638 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.95■□□□□ 0.62
RAD9AQ99638 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAD9AQ99638 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RAD9AQ99638 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
RAD9AQ99638 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RAD9AQ99638 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RAD9AQ99638 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.94■□□□□ 0.62
RAD9AQ99638 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RAD9AQ99638 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RAD9AQ99638 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RAD9AQ99638 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAD9AQ99638 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.94■□□□□ 0.62
RAD9AQ99638 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC18.94■□□□□ 0.62
RAD9AQ99638 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC18.94■□□□□ 0.62
RAD9AQ99638 AC074386.1-202ENST00000463561 864 ntBASIC18.94■□□□□ 0.62
RAD9AQ99638 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.94■□□□□ 0.62
RAD9AQ99638 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC18.94■□□□□ 0.62
RAD9AQ99638 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.94■□□□□ 0.62
RAD9AQ99638 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.94■□□□□ 0.62
RAD9AQ99638 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC18.94■□□□□ 0.62
RAD9AQ99638 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.94■□□□□ 0.62
RAD9AQ99638 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
RAD9AQ99638 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAD9AQ99638 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RAD9AQ99638 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAD9AQ99638 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAD9AQ99638 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAD9AQ99638 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RAD9AQ99638 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.94■□□□□ 0.62
RAD9AQ99638 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.94■□□□□ 0.62
RAD9AQ99638 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
RAD9AQ99638 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAD9AQ99638 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAD9AQ99638 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAD9AQ99638 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAD9AQ99638 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RAD9AQ99638 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAD9AQ99638 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAD9AQ99638 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RAD9AQ99638 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.93■□□□□ 0.62
RAD9AQ99638 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
RAD9AQ99638 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAD9AQ99638 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAD9AQ99638 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
RAD9AQ99638 AL139400.1-201ENST00000366220 510 ntBASIC18.93■□□□□ 0.62
RAD9AQ99638 DDT-204ENST00000404092 805 ntTSL 3 BASIC18.93■□□□□ 0.62
RAD9AQ99638 FAM58CP-201ENST00000435741 640 ntBASIC18.93■□□□□ 0.62
RAD9AQ99638 RHOQP3-201ENST00000437982 621 ntBASIC18.93■□□□□ 0.62
RAD9AQ99638 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RAD9AQ99638 DUTP2-201ENST00000519164 463 ntBASIC18.93■□□□□ 0.62
RAD9AQ99638 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
RAD9AQ99638 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.93■□□□□ 0.62
RAD9AQ99638 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.93■□□□□ 0.62
RAD9AQ99638 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.93■□□□□ 0.62
RAD9AQ99638 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAD9AQ99638 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.93■□□□□ 0.62
RAD9AQ99638 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms