Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CALR3Q96L12 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.9■□□□□ 0.62
CALR3Q96L12 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.9■□□□□ 0.62
CALR3Q96L12 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CALR3Q96L12 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.9■□□□□ 0.62
CALR3Q96L12 AC034232.1-201ENST00000506026 1064 ntBASIC18.9■□□□□ 0.62
CALR3Q96L12 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CALR3Q96L12 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.9■□□□□ 0.62
CALR3Q96L12 AL355075.4-201ENST00000554988 638 ntBASIC18.9■□□□□ 0.62
CALR3Q96L12 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CALR3Q96L12 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.9■□□□□ 0.62
CALR3Q96L12 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CALR3Q96L12 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.9■□□□□ 0.62
CALR3Q96L12 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CALR3Q96L12 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CALR3Q96L12 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CALR3Q96L12 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CALR3Q96L12 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CALR3Q96L12 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.9■□□□□ 0.62
CALR3Q96L12 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.9■□□□□ 0.62
CALR3Q96L12 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.9■□□□□ 0.62
CALR3Q96L12 AC124067.4-201ENST00000519691 2379 ntBASIC18.9■□□□□ 0.62
CALR3Q96L12 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.9■□□□□ 0.62
CALR3Q96L12 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CALR3Q96L12 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.89■□□□□ 0.62
CALR3Q96L12 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.89■□□□□ 0.62
CALR3Q96L12 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.89■□□□□ 0.62
CALR3Q96L12 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.89■□□□□ 0.62
CALR3Q96L12 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CALR3Q96L12 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.89■□□□□ 0.62
CALR3Q96L12 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
CALR3Q96L12 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.89■□□□□ 0.61
CALR3Q96L12 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CALR3Q96L12 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CALR3Q96L12 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CALR3Q96L12 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CALR3Q96L12 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.89■□□□□ 0.61
CALR3Q96L12 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CALR3Q96L12 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CALR3Q96L12 AC022211.2-201ENST00000585075 2527 ntBASIC18.89■□□□□ 0.61
CALR3Q96L12 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CALR3Q96L12 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CALR3Q96L12 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CALR3Q96L12 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CALR3Q96L12 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.89■□□□□ 0.61
CALR3Q96L12 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CALR3Q96L12 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.89■□□□□ 0.61
CALR3Q96L12 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.89■□□□□ 0.61
CALR3Q96L12 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.89■□□□□ 0.61
CALR3Q96L12 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.89■□□□□ 0.61
CALR3Q96L12 AC010947.1-201ENST00000623454 693 ntBASIC18.89■□□□□ 0.61
CALR3Q96L12 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.89■□□□□ 0.61
CALR3Q96L12 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CALR3Q96L12 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CALR3Q96L12 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CALR3Q96L12 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
CALR3Q96L12 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CALR3Q96L12 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CALR3Q96L12 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CALR3Q96L12 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
CALR3Q96L12 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CALR3Q96L12 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CALR3Q96L12 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CALR3Q96L12 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.88■□□□□ 0.61
CALR3Q96L12 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CALR3Q96L12 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CALR3Q96L12 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CALR3Q96L12 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.88■□□□□ 0.61
CALR3Q96L12 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CALR3Q96L12 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CALR3Q96L12 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CALR3Q96L12 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.88■□□□□ 0.61
CALR3Q96L12 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CALR3Q96L12 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.88■□□□□ 0.61
CALR3Q96L12 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.88■□□□□ 0.61
CALR3Q96L12 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.88■□□□□ 0.61
CALR3Q96L12 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.88■□□□□ 0.61
CALR3Q96L12 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CALR3Q96L12 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CALR3Q96L12 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.88■□□□□ 0.61
CALR3Q96L12 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.88■□□□□ 0.61
CALR3Q96L12 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.88■□□□□ 0.61
CALR3Q96L12 FAM87A-204ENST00000613235 858 ntBASIC18.88■□□□□ 0.61
CALR3Q96L12 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.88■□□□□ 0.61
CALR3Q96L12 AC084018.2-201ENST00000613093 2607 ntBASIC18.88■□□□□ 0.61
CALR3Q96L12 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CALR3Q96L12 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CALR3Q96L12 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.88■□□□□ 0.61
CALR3Q96L12 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CALR3Q96L12 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CALR3Q96L12 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CALR3Q96L12 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CALR3Q96L12 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.88■□□□□ 0.61
CALR3Q96L12 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.88■□□□□ 0.61
CALR3Q96L12 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CALR3Q96L12 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
CALR3Q96L12 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CALR3Q96L12 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CALR3Q96L12 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CALR3Q96L12 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms