Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC14.11□□□□□ -0.15
NPIPB3Q92617 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
NPIPB3Q92617 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPB3Q92617 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPB3Q92617 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPB3Q92617 AC009053.2-201ENST00000563701 2365 ntBASIC14.11□□□□□ -0.15
NPIPB3Q92617 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPB3Q92617 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
NPIPB3Q92617 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPB3Q92617 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC14.11□□□□□ -0.15
NPIPB3Q92617 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
NPIPB3Q92617 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPB3Q92617 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPB3Q92617 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPB3Q92617 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
NPIPB3Q92617 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPB3Q92617 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
NPIPB3Q92617 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC14.11□□□□□ -0.15
NPIPB3Q92617 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPB3Q92617 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPB3Q92617 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC14.11□□□□□ -0.15
NPIPB3Q92617 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPB3Q92617 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC14.1□□□□□ -0.15
NPIPB3Q92617 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPB3Q92617 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPB3Q92617 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPB3Q92617 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPB3Q92617 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
NPIPB3Q92617 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPB3Q92617 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPB3Q92617 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPB3Q92617 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPB3Q92617 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPB3Q92617 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
NPIPB3Q92617 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPB3Q92617 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
NPIPB3Q92617 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPB3Q92617 GAD2-202ENST00000376248 680 ntTSL 5 BASIC14.1□□□□□ -0.15
NPIPB3Q92617 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
NPIPB3Q92617 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPB3Q92617 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC14.1□□□□□ -0.15
NPIPB3Q92617 AC128688.1-201ENST00000487626 519 ntBASIC14.1□□□□□ -0.15
NPIPB3Q92617 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPB3Q92617 EGLN1P1-201ENST00000531623 762 ntBASIC14.1□□□□□ -0.15
NPIPB3Q92617 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC14.1□□□□□ -0.15
NPIPB3Q92617 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPB3Q92617 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPB3Q92617 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPB3Q92617 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPB3Q92617 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
NPIPB3Q92617 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
NPIPB3Q92617 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPB3Q92617 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPB3Q92617 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
NPIPB3Q92617 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC14.1□□□□□ -0.15
NPIPB3Q92617 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPB3Q92617 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPB3Q92617 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPB3Q92617 AC133963.1-201ENST00000504166 1679 ntBASIC14.1□□□□□ -0.15
NPIPB3Q92617 KRT17P2-201ENST00000300992 1314 ntBASIC14.1□□□□□ -0.15
NPIPB3Q92617 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPB3Q92617 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPB3Q92617 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPB3Q92617 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPB3Q92617 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPB3Q92617 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
NPIPB3Q92617 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPB3Q92617 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPB3Q92617 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPB3Q92617 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC14.09□□□□□ -0.15
NPIPB3Q92617 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPB3Q92617 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPB3Q92617 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPB3Q92617 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC14.09□□□□□ -0.15
NPIPB3Q92617 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPB3Q92617 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPB3Q92617 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPB3Q92617 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPB3Q92617 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPB3Q92617 INGX-201ENST00000359239 846 ntBASIC14.09□□□□□ -0.15
NPIPB3Q92617 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
NPIPB3Q92617 AC009947.2-201ENST00000444014 672 ntBASIC14.09□□□□□ -0.15
NPIPB3Q92617 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC14.09□□□□□ -0.15
NPIPB3Q92617 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC14.09□□□□□ -0.15
NPIPB3Q92617 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC14.09□□□□□ -0.15
NPIPB3Q92617 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPB3Q92617 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC14.09□□□□□ -0.15
NPIPB3Q92617 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC14.09□□□□□ -0.15
NPIPB3Q92617 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPB3Q92617 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPB3Q92617 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC14.09□□□□□ -0.15
NPIPB3Q92617 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPB3Q92617 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPB3Q92617 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPB3Q92617 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
NPIPB3Q92617 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC14.09□□□□□ -0.15
NPIPB3Q92617 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
NPIPB3Q92617 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC14.09□□□□□ -0.15
NPIPB3Q92617 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPB3Q92617 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms