Protein–RNA interactions for Protein: Q902F9

HERVK_113, Endogenous retrovirus group K member 113 Env polyprotein, humanhuman

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113Q902F9 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HERVK_113Q902F9 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC19.05■□□□□ 0.64
HERVK_113Q902F9 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC19.05■□□□□ 0.64
HERVK_113Q902F9 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HERVK_113Q902F9 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HERVK_113Q902F9 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HERVK_113Q902F9 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
HERVK_113Q902F9 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
HERVK_113Q902F9 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
HERVK_113Q902F9 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.04■□□□□ 0.64
HERVK_113Q902F9 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
HERVK_113Q902F9 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC19.04■□□□□ 0.64
HERVK_113Q902F9 DDX43P3-201ENST00000441064 443 ntBASIC19.04■□□□□ 0.64
HERVK_113Q902F9 HLA-J-202ENST00000469281 1241 ntBASIC19.04■□□□□ 0.64
HERVK_113Q902F9 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
HERVK_113Q902F9 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
HERVK_113Q902F9 AC022145.2-201ENST00000598203 171 ntBASIC19.04■□□□□ 0.64
HERVK_113Q902F9 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.04■□□□□ 0.64
HERVK_113Q902F9 LINC00628-201ENST00000628516 1289 ntBASIC19.04■□□□□ 0.64
HERVK_113Q902F9 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC19.04■□□□□ 0.64
HERVK_113Q902F9 AC007952.6-201ENST00000573168 2673 ntBASIC19.04■□□□□ 0.64
HERVK_113Q902F9 AC003957.1-201ENST00000625108 2673 ntBASIC19.04■□□□□ 0.64
HERVK_113Q902F9 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HERVK_113Q902F9 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC19.04■□□□□ 0.64
HERVK_113Q902F9 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
HERVK_113Q902F9 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HERVK_113Q902F9 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HERVK_113Q902F9 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HERVK_113Q902F9 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
HERVK_113Q902F9 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HERVK_113Q902F9 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HERVK_113Q902F9 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HERVK_113Q902F9 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HERVK_113Q902F9 PCDHAC2-203ENST00000615316 3011 ntBASIC19.03■□□□□ 0.64
HERVK_113Q902F9 FAM86GP-201ENST00000448322 971 ntBASIC19.03■□□□□ 0.64
HERVK_113Q902F9 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC19.03■□□□□ 0.64
HERVK_113Q902F9 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC19.03■□□□□ 0.64
HERVK_113Q902F9 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
HERVK_113Q902F9 AC069262.1-201ENST00000539058 672 ntBASIC19.03■□□□□ 0.64
HERVK_113Q902F9 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HERVK_113Q902F9 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC19.03■□□□□ 0.64
HERVK_113Q902F9 AJ011932.1-201ENST00000621707 465 ntBASIC19.03■□□□□ 0.64
HERVK_113Q902F9 Z92544.3-201ENST00000624747 417 ntBASIC19.03■□□□□ 0.64
HERVK_113Q902F9 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC19.03■□□□□ 0.64
HERVK_113Q902F9 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
HERVK_113Q902F9 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HERVK_113Q902F9 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HERVK_113Q902F9 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
HERVK_113Q902F9 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HERVK_113Q902F9 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.03■□□□□ 0.64
HERVK_113Q902F9 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC19.03■□□□□ 0.64
HERVK_113Q902F9 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.03■□□□□ 0.64
HERVK_113Q902F9 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HERVK_113Q902F9 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HERVK_113Q902F9 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HERVK_113Q902F9 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC19.02■□□□□ 0.64
HERVK_113Q902F9 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
HERVK_113Q902F9 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.02■□□□□ 0.64
HERVK_113Q902F9 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HERVK_113Q902F9 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC19.02■□□□□ 0.64
HERVK_113Q902F9 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC19.02■□□□□ 0.64
HERVK_113Q902F9 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC19.02■□□□□ 0.64
HERVK_113Q902F9 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC19.02■□□□□ 0.64
HERVK_113Q902F9 RNA5SP421-201ENST00000516864 134 ntBASIC19.02■□□□□ 0.64
HERVK_113Q902F9 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC19.02■□□□□ 0.64
HERVK_113Q902F9 PUDP-206ENST00000540122 825 ntTSL 2 BASIC19.02■□□□□ 0.64
HERVK_113Q902F9 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC19.02■□□□□ 0.64
HERVK_113Q902F9 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC19.02■□□□□ 0.64
HERVK_113Q902F9 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
HERVK_113Q902F9 AF228730.6-201ENST00000641497 218 ntBASIC19.02■□□□□ 0.64
HERVK_113Q902F9 AC084121.3-201ENST00000641716 218 ntBASIC19.02■□□□□ 0.64
HERVK_113Q902F9 AC105233.6-201ENST00000642093 218 ntBASIC19.02■□□□□ 0.64
HERVK_113Q902F9 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.02■□□□□ 0.64
HERVK_113Q902F9 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
HERVK_113Q902F9 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC19.02■□□□□ 0.63
HERVK_113Q902F9 AC005082.1-201ENST00000413042 2259 ntBASIC19.02■□□□□ 0.63
HERVK_113Q902F9 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HERVK_113Q902F9 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HERVK_113Q902F9 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
HERVK_113Q902F9 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
HERVK_113Q902F9 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC19.01■□□□□ 0.63
HERVK_113Q902F9 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
HERVK_113Q902F9 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC19.01■□□□□ 0.63
HERVK_113Q902F9 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC19.01■□□□□ 0.63
HERVK_113Q902F9 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC19.01■□□□□ 0.63
HERVK_113Q902F9 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC19.01■□□□□ 0.63
HERVK_113Q902F9 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.01■□□□□ 0.63
HERVK_113Q902F9 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HERVK_113Q902F9 AC015911.4-201ENST00000588022 1070 ntBASIC19.01■□□□□ 0.63
HERVK_113Q902F9 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC19.01■□□□□ 0.63
HERVK_113Q902F9 AC068137.2-201ENST00000605408 478 ntBASIC19.01■□□□□ 0.63
HERVK_113Q902F9 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC19.01■□□□□ 0.63
HERVK_113Q902F9 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HERVK_113Q902F9 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC19.01■□□□□ 0.63
HERVK_113Q902F9 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HERVK_113Q902F9 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
HERVK_113Q902F9 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.01■□□□□ 0.63
HERVK_113Q902F9 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.01■□□□□ 0.63
HERVK_113Q902F9 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
HERVK_113Q902F9 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms