Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.73■□□□□ 0.59
SHKBP1Q8TBC3 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
SHKBP1Q8TBC3 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.72■□□□□ 0.59
SHKBP1Q8TBC3 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.72■□□□□ 0.59
SHKBP1Q8TBC3 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SHKBP1Q8TBC3 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SHKBP1Q8TBC3 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SHKBP1Q8TBC3 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.72■□□□□ 0.59
SHKBP1Q8TBC3 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.72■□□□□ 0.59
SHKBP1Q8TBC3 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
SHKBP1Q8TBC3 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
SHKBP1Q8TBC3 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
SHKBP1Q8TBC3 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SHKBP1Q8TBC3 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SHKBP1Q8TBC3 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.72■□□□□ 0.59
SHKBP1Q8TBC3 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.72■□□□□ 0.59
SHKBP1Q8TBC3 AC139887.3-201ENST00000568585 713 ntBASIC18.72■□□□□ 0.59
SHKBP1Q8TBC3 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC18.72■□□□□ 0.59
SHKBP1Q8TBC3 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.72■□□□□ 0.59
SHKBP1Q8TBC3 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.72■□□□□ 0.59
SHKBP1Q8TBC3 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.72■□□□□ 0.59
SHKBP1Q8TBC3 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SHKBP1Q8TBC3 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SHKBP1Q8TBC3 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
SHKBP1Q8TBC3 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.72■□□□□ 0.59
SHKBP1Q8TBC3 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SHKBP1Q8TBC3 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SHKBP1Q8TBC3 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SHKBP1Q8TBC3 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
SHKBP1Q8TBC3 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
SHKBP1Q8TBC3 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.72■□□□□ 0.59
SHKBP1Q8TBC3 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SHKBP1Q8TBC3 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SHKBP1Q8TBC3 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.71■□□□□ 0.59
SHKBP1Q8TBC3 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SHKBP1Q8TBC3 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.71■□□□□ 0.59
SHKBP1Q8TBC3 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SHKBP1Q8TBC3 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SHKBP1Q8TBC3 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
SHKBP1Q8TBC3 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
SHKBP1Q8TBC3 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SHKBP1Q8TBC3 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.71■□□□□ 0.59
SHKBP1Q8TBC3 AC067852.2-201ENST00000590513 2313 ntBASIC18.71■□□□□ 0.59
SHKBP1Q8TBC3 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SHKBP1Q8TBC3 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
SHKBP1Q8TBC3 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
SHKBP1Q8TBC3 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.71■□□□□ 0.59
SHKBP1Q8TBC3 AC021087.4-201ENST00000563761 564 ntBASIC18.71■□□□□ 0.59
SHKBP1Q8TBC3 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.71■□□□□ 0.59
SHKBP1Q8TBC3 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.71■□□□□ 0.59
SHKBP1Q8TBC3 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
SHKBP1Q8TBC3 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SHKBP1Q8TBC3 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SHKBP1Q8TBC3 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SHKBP1Q8TBC3 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SHKBP1Q8TBC3 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
SHKBP1Q8TBC3 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.71■□□□□ 0.58
SHKBP1Q8TBC3 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.58
SHKBP1Q8TBC3 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.71■□□□□ 0.58
SHKBP1Q8TBC3 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.7■□□□□ 0.58
SHKBP1Q8TBC3 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SHKBP1Q8TBC3 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHKBP1Q8TBC3 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.7■□□□□ 0.58
SHKBP1Q8TBC3 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHKBP1Q8TBC3 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.7■□□□□ 0.58
SHKBP1Q8TBC3 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
SHKBP1Q8TBC3 AC090164.3-201ENST00000610780 2143 ntBASIC18.7■□□□□ 0.58
SHKBP1Q8TBC3 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SHKBP1Q8TBC3 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHKBP1Q8TBC3 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.7■□□□□ 0.58
SHKBP1Q8TBC3 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHKBP1Q8TBC3 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHKBP1Q8TBC3 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
SHKBP1Q8TBC3 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.7■□□□□ 0.58
SHKBP1Q8TBC3 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.7■□□□□ 0.58
SHKBP1Q8TBC3 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.7■□□□□ 0.58
SHKBP1Q8TBC3 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SHKBP1Q8TBC3 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.7■□□□□ 0.58
SHKBP1Q8TBC3 AC106730.1-201ENST00000566722 1090 ntBASIC18.7■□□□□ 0.58
SHKBP1Q8TBC3 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHKBP1Q8TBC3 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.7■□□□□ 0.58
SHKBP1Q8TBC3 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHKBP1Q8TBC3 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SHKBP1Q8TBC3 NOC2LP1-202ENST00000452600 2235 ntBASIC18.7■□□□□ 0.58
SHKBP1Q8TBC3 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHKBP1Q8TBC3 AL031598.1-201ENST00000561511 1773 ntBASIC18.7■□□□□ 0.58
SHKBP1Q8TBC3 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SHKBP1Q8TBC3 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.7■□□□□ 0.58
SHKBP1Q8TBC3 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHKBP1Q8TBC3 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.7■□□□□ 0.58
SHKBP1Q8TBC3 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
SHKBP1Q8TBC3 AC126763.1-201ENST00000552015 2118 ntBASIC18.7■□□□□ 0.58
SHKBP1Q8TBC3 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHKBP1Q8TBC3 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SHKBP1Q8TBC3 ESPNP-201ENST00000270691 2015 ntBASIC18.69■□□□□ 0.58
SHKBP1Q8TBC3 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.69■□□□□ 0.58
SHKBP1Q8TBC3 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SHKBP1Q8TBC3 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SHKBP1Q8TBC3 AL354751.1-201ENST00000412768 1863 ntBASIC18.69■□□□□ 0.58
SHKBP1Q8TBC3 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms