Protein–RNA interactions for Protein: Q8NG48

LINS1, Protein Lines homolog 1, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINS1Q8NG48 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
LINS1Q8NG48 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC22.28■■□□□ 1.16
LINS1Q8NG48 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
LINS1Q8NG48 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
LINS1Q8NG48 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
LINS1Q8NG48 AL773604.1-201ENST00000617417 272 ntBASIC22.28■■□□□ 1.16
LINS1Q8NG48 AC073592.4-201ENST00000623827 446 ntBASIC22.28■■□□□ 1.16
LINS1Q8NG48 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
LINS1Q8NG48 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC22.28■■□□□ 1.16
LINS1Q8NG48 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
LINS1Q8NG48 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
LINS1Q8NG48 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
LINS1Q8NG48 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
LINS1Q8NG48 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
LINS1Q8NG48 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
LINS1Q8NG48 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
LINS1Q8NG48 AC079776.2-201ENST00000641154 1609 ntBASIC22.28■■□□□ 1.16
LINS1Q8NG48 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
LINS1Q8NG48 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
LINS1Q8NG48 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC22.27■■□□□ 1.16
LINS1Q8NG48 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
LINS1Q8NG48 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC22.27■■□□□ 1.16
LINS1Q8NG48 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
LINS1Q8NG48 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
LINS1Q8NG48 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
LINS1Q8NG48 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
LINS1Q8NG48 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC22.27■■□□□ 1.16
LINS1Q8NG48 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC22.27■■□□□ 1.16
LINS1Q8NG48 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
LINS1Q8NG48 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
LINS1Q8NG48 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC22.27■■□□□ 1.16
LINS1Q8NG48 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC22.27■■□□□ 1.16
LINS1Q8NG48 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC22.27■■□□□ 1.16
LINS1Q8NG48 AC021087.4-201ENST00000563761 564 ntBASIC22.27■■□□□ 1.16
LINS1Q8NG48 NKAPP1-205ENST00000585790 367 ntBASIC22.27■■□□□ 1.16
LINS1Q8NG48 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC22.27■■□□□ 1.16
LINS1Q8NG48 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
LINS1Q8NG48 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC22.27■■□□□ 1.16
LINS1Q8NG48 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
LINS1Q8NG48 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC22.27■■□□□ 1.16
LINS1Q8NG48 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
LINS1Q8NG48 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC22.27■■□□□ 1.15
LINS1Q8NG48 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC22.27■■□□□ 1.15
LINS1Q8NG48 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC22.27■■□□□ 1.15
LINS1Q8NG48 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC22.27■■□□□ 1.15
LINS1Q8NG48 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
LINS1Q8NG48 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
LINS1Q8NG48 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC22.26■■□□□ 1.15
LINS1Q8NG48 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
LINS1Q8NG48 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
LINS1Q8NG48 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC22.26■■□□□ 1.15
LINS1Q8NG48 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
LINS1Q8NG48 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
LINS1Q8NG48 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC22.26■■□□□ 1.15
LINS1Q8NG48 AC073648.2-201ENST00000510116 352 ntBASIC22.26■■□□□ 1.15
LINS1Q8NG48 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
LINS1Q8NG48 PENK-208ENST00000523051 772 ntTSL 5 BASIC22.26■■□□□ 1.15
LINS1Q8NG48 PC-208ENST00000529047 1607 ntTSL 3 BASIC22.26■■□□□ 1.15
LINS1Q8NG48 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
LINS1Q8NG48 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
LINS1Q8NG48 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
LINS1Q8NG48 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
LINS1Q8NG48 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
LINS1Q8NG48 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
LINS1Q8NG48 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
LINS1Q8NG48 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
LINS1Q8NG48 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
LINS1Q8NG48 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC22.25■■□□□ 1.15
LINS1Q8NG48 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
LINS1Q8NG48 HARS-201ENST00000307633 1780 ntTSL 2 BASIC22.25■■□□□ 1.15
LINS1Q8NG48 SIGLEC16-201ENST00000599858 1437 ntBASIC22.25■■□□□ 1.15
LINS1Q8NG48 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
LINS1Q8NG48 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
LINS1Q8NG48 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
LINS1Q8NG48 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
LINS1Q8NG48 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC22.25■■□□□ 1.15
LINS1Q8NG48 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
LINS1Q8NG48 AL031284.1-201ENST00000419297 478 ntBASIC22.25■■□□□ 1.15
LINS1Q8NG48 HNRNPDP1-201ENST00000439535 754 ntBASIC22.25■■□□□ 1.15
LINS1Q8NG48 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
LINS1Q8NG48 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC22.25■■□□□ 1.15
LINS1Q8NG48 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC22.25■■□□□ 1.15
LINS1Q8NG48 COX5A-202ENST00000562233 441 ntTSL 3 BASIC22.25■■□□□ 1.15
LINS1Q8NG48 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC22.25■■□□□ 1.15
LINS1Q8NG48 AC073592.5-201ENST00000624854 528 ntBASIC22.25■■□□□ 1.15
LINS1Q8NG48 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
LINS1Q8NG48 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
LINS1Q8NG48 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
LINS1Q8NG48 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
LINS1Q8NG48 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
LINS1Q8NG48 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
LINS1Q8NG48 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
LINS1Q8NG48 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC22.25■■□□□ 1.15
LINS1Q8NG48 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
LINS1Q8NG48 AC132938.5-201ENST00000624980 1813 ntBASIC22.24■■□□□ 1.15
LINS1Q8NG48 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
LINS1Q8NG48 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
LINS1Q8NG48 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC22.24■■□□□ 1.15
LINS1Q8NG48 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC22.24■■□□□ 1.15
LINS1Q8NG48 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms