Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PCDH20Q8N6Y1 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDH20Q8N6Y1 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDH20Q8N6Y1 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDH20Q8N6Y1 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDH20Q8N6Y1 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDH20Q8N6Y1 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDH20Q8N6Y1 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDH20Q8N6Y1 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDH20Q8N6Y1 ABALON-201ENST00000629058 1903 ntBASIC18.23■□□□□ 0.51
PCDH20Q8N6Y1 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDH20Q8N6Y1 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDH20Q8N6Y1 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDH20Q8N6Y1 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDH20Q8N6Y1 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDH20Q8N6Y1 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDH20Q8N6Y1 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDH20Q8N6Y1 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
PCDH20Q8N6Y1 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
PCDH20Q8N6Y1 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
PCDH20Q8N6Y1 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
PCDH20Q8N6Y1 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDH20Q8N6Y1 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDH20Q8N6Y1 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDH20Q8N6Y1 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.23■□□□□ 0.51
PCDH20Q8N6Y1 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDH20Q8N6Y1 MINOS1P3-201ENST00000457048 203 ntBASIC18.23■□□□□ 0.51
PCDH20Q8N6Y1 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.23■□□□□ 0.51
PCDH20Q8N6Y1 AC112698.1-201ENST00000510299 916 ntBASIC18.23■□□□□ 0.51
PCDH20Q8N6Y1 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.23■□□□□ 0.51
PCDH20Q8N6Y1 DUTP2-201ENST00000519164 463 ntBASIC18.23■□□□□ 0.51
PCDH20Q8N6Y1 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.23■□□□□ 0.51
PCDH20Q8N6Y1 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.23■□□□□ 0.51
PCDH20Q8N6Y1 AC099336.1-202ENST00000602961 463 ntBASIC18.23■□□□□ 0.51
PCDH20Q8N6Y1 AL121772.3-201ENST00000610840 674 ntBASIC18.23■□□□□ 0.51
PCDH20Q8N6Y1 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
PCDH20Q8N6Y1 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
PCDH20Q8N6Y1 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDH20Q8N6Y1 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDH20Q8N6Y1 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDH20Q8N6Y1 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.23■□□□□ 0.51
PCDH20Q8N6Y1 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDH20Q8N6Y1 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDH20Q8N6Y1 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDH20Q8N6Y1 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDH20Q8N6Y1 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDH20Q8N6Y1 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDH20Q8N6Y1 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDH20Q8N6Y1 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.22■□□□□ 0.51
PCDH20Q8N6Y1 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.22■□□□□ 0.51
PCDH20Q8N6Y1 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDH20Q8N6Y1 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDH20Q8N6Y1 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDH20Q8N6Y1 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
PCDH20Q8N6Y1 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
PCDH20Q8N6Y1 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDH20Q8N6Y1 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDH20Q8N6Y1 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDH20Q8N6Y1 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
PCDH20Q8N6Y1 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDH20Q8N6Y1 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDH20Q8N6Y1 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.22■□□□□ 0.51
PCDH20Q8N6Y1 AL096828.2-201ENST00000567259 1965 ntBASIC18.22■□□□□ 0.51
PCDH20Q8N6Y1 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDH20Q8N6Y1 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
PCDH20Q8N6Y1 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDH20Q8N6Y1 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDH20Q8N6Y1 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.22■□□□□ 0.51
PCDH20Q8N6Y1 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
PCDH20Q8N6Y1 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH20Q8N6Y1 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDH20Q8N6Y1 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH20Q8N6Y1 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
PCDH20Q8N6Y1 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH20Q8N6Y1 AC135776.1-201ENST00000319817 2481 ntBASIC18.21■□□□□ 0.51
PCDH20Q8N6Y1 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDH20Q8N6Y1 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH20Q8N6Y1 FOSL1P1-201ENST00000511041 816 ntBASIC18.21■□□□□ 0.51
PCDH20Q8N6Y1 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.21■□□□□ 0.51
PCDH20Q8N6Y1 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
PCDH20Q8N6Y1 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH20Q8N6Y1 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH20Q8N6Y1 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDH20Q8N6Y1 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDH20Q8N6Y1 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
PCDH20Q8N6Y1 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH20Q8N6Y1 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDH20Q8N6Y1 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
PCDH20Q8N6Y1 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH20Q8N6Y1 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH20Q8N6Y1 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDH20Q8N6Y1 AC022898.2-201ENST00000616822 1312 ntBASIC18.21■□□□□ 0.51
PCDH20Q8N6Y1 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
PCDH20Q8N6Y1 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
PCDH20Q8N6Y1 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH20Q8N6Y1 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH20Q8N6Y1 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDH20Q8N6Y1 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.2■□□□□ 0.5
PCDH20Q8N6Y1 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.2■□□□□ 0.5
PCDH20Q8N6Y1 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms