Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC33Q8N5R6 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC33Q8N5R6 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC33Q8N5R6 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC33Q8N5R6 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC33Q8N5R6 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC33Q8N5R6 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC33Q8N5R6 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC33Q8N5R6 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC33Q8N5R6 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.74■□□□□ 0.59
CCDC33Q8N5R6 AC233702.3-201ENST00000578656 1387 ntBASIC18.74■□□□□ 0.59
CCDC33Q8N5R6 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC33Q8N5R6 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC33Q8N5R6 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.74■□□□□ 0.59
CCDC33Q8N5R6 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CCDC33Q8N5R6 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
CCDC33Q8N5R6 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.74■□□□□ 0.59
CCDC33Q8N5R6 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC33Q8N5R6 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.74■□□□□ 0.59
CCDC33Q8N5R6 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC33Q8N5R6 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CCDC33Q8N5R6 AC099336.1-202ENST00000602961 463 ntBASIC18.74■□□□□ 0.59
CCDC33Q8N5R6 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC33Q8N5R6 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC33Q8N5R6 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC33Q8N5R6 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC33Q8N5R6 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC33Q8N5R6 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC33Q8N5R6 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.74■□□□□ 0.59
CCDC33Q8N5R6 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC33Q8N5R6 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.74■□□□□ 0.59
CCDC33Q8N5R6 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC33Q8N5R6 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.74■□□□□ 0.59
CCDC33Q8N5R6 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC33Q8N5R6 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CCDC33Q8N5R6 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CCDC33Q8N5R6 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC33Q8N5R6 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC33Q8N5R6 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CCDC33Q8N5R6 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC33Q8N5R6 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.73■□□□□ 0.59
CCDC33Q8N5R6 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC33Q8N5R6 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC33Q8N5R6 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC33Q8N5R6 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CCDC33Q8N5R6 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC33Q8N5R6 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC33Q8N5R6 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
CCDC33Q8N5R6 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.73■□□□□ 0.59
CCDC33Q8N5R6 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC33Q8N5R6 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC33Q8N5R6 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.73■□□□□ 0.59
CCDC33Q8N5R6 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC33Q8N5R6 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.73■□□□□ 0.59
CCDC33Q8N5R6 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.73■□□□□ 0.59
CCDC33Q8N5R6 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
CCDC33Q8N5R6 AC024563.2-201ENST00000603282 481 ntBASIC18.73■□□□□ 0.59
CCDC33Q8N5R6 AC124864.1-201ENST00000623408 392 ntBASIC18.73■□□□□ 0.59
CCDC33Q8N5R6 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.73■□□□□ 0.59
CCDC33Q8N5R6 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC33Q8N5R6 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC33Q8N5R6 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CCDC33Q8N5R6 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC33Q8N5R6 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.73■□□□□ 0.59
CCDC33Q8N5R6 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC33Q8N5R6 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.73■□□□□ 0.59
CCDC33Q8N5R6 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CCDC33Q8N5R6 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC33Q8N5R6 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC33Q8N5R6 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CCDC33Q8N5R6 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC33Q8N5R6 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.73■□□□□ 0.59
CCDC33Q8N5R6 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.73■□□□□ 0.59
CCDC33Q8N5R6 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.72■□□□□ 0.59
CCDC33Q8N5R6 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC33Q8N5R6 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC33Q8N5R6 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC33Q8N5R6 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC33Q8N5R6 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC33Q8N5R6 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC33Q8N5R6 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.72■□□□□ 0.59
CCDC33Q8N5R6 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC33Q8N5R6 IGHGP-201ENST00000390555 1178 ntBASIC18.72■□□□□ 0.59
CCDC33Q8N5R6 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC33Q8N5R6 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.72■□□□□ 0.59
CCDC33Q8N5R6 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC33Q8N5R6 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.72■□□□□ 0.59
CCDC33Q8N5R6 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC33Q8N5R6 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CCDC33Q8N5R6 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.72■□□□□ 0.59
CCDC33Q8N5R6 MIR3180-4-201ENST00000582223 153 ntBASIC18.72■□□□□ 0.59
CCDC33Q8N5R6 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.72■□□□□ 0.59
CCDC33Q8N5R6 AC104692.2-201ENST00000603054 253 ntBASIC18.72■□□□□ 0.59
CCDC33Q8N5R6 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.72■□□□□ 0.59
CCDC33Q8N5R6 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.72■□□□□ 0.59
CCDC33Q8N5R6 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC33Q8N5R6 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CCDC33Q8N5R6 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.72■□□□□ 0.59
CCDC33Q8N5R6 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC33Q8N5R6 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms