Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.83■□□□□ 0.28
ARHGEF39Q8N4T4 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.83■□□□□ 0.28
ARHGEF39Q8N4T4 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.83■□□□□ 0.28
ARHGEF39Q8N4T4 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
ARHGEF39Q8N4T4 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ARHGEF39Q8N4T4 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.83■□□□□ 0.28
ARHGEF39Q8N4T4 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ARHGEF39Q8N4T4 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.83■□□□□ 0.28
ARHGEF39Q8N4T4 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ARHGEF39Q8N4T4 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ARHGEF39Q8N4T4 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.82■□□□□ 0.28
ARHGEF39Q8N4T4 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ARHGEF39Q8N4T4 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ARHGEF39Q8N4T4 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.82■□□□□ 0.28
ARHGEF39Q8N4T4 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ARHGEF39Q8N4T4 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
ARHGEF39Q8N4T4 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
ARHGEF39Q8N4T4 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ARHGEF39Q8N4T4 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.82■□□□□ 0.28
ARHGEF39Q8N4T4 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.82■□□□□ 0.28
ARHGEF39Q8N4T4 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
ARHGEF39Q8N4T4 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.82■□□□□ 0.28
ARHGEF39Q8N4T4 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ARHGEF39Q8N4T4 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
ARHGEF39Q8N4T4 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.82■□□□□ 0.28
ARHGEF39Q8N4T4 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.82■□□□□ 0.28
ARHGEF39Q8N4T4 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.82■□□□□ 0.28
ARHGEF39Q8N4T4 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ARHGEF39Q8N4T4 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.82■□□□□ 0.28
ARHGEF39Q8N4T4 AC106795.1-205ENST00000512851 1056 ntBASIC16.82■□□□□ 0.28
ARHGEF39Q8N4T4 AL121894.2-201ENST00000602977 491 ntBASIC16.82■□□□□ 0.28
ARHGEF39Q8N4T4 AC116407.2-201ENST00000613639 860 ntBASIC16.82■□□□□ 0.28
ARHGEF39Q8N4T4 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ARHGEF39Q8N4T4 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
ARHGEF39Q8N4T4 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ARHGEF39Q8N4T4 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ARHGEF39Q8N4T4 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ARHGEF39Q8N4T4 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ARHGEF39Q8N4T4 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.82■□□□□ 0.28
ARHGEF39Q8N4T4 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ARHGEF39Q8N4T4 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ARHGEF39Q8N4T4 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ARHGEF39Q8N4T4 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ARHGEF39Q8N4T4 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
ARHGEF39Q8N4T4 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.81■□□□□ 0.28
ARHGEF39Q8N4T4 AC006116.8-202ENST00000587620 1550 ntBASIC16.81■□□□□ 0.28
ARHGEF39Q8N4T4 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ARHGEF39Q8N4T4 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.81■□□□□ 0.28
ARHGEF39Q8N4T4 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16.81■□□□□ 0.28
ARHGEF39Q8N4T4 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
ARHGEF39Q8N4T4 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.81■□□□□ 0.28
ARHGEF39Q8N4T4 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.81■□□□□ 0.28
ARHGEF39Q8N4T4 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
ARHGEF39Q8N4T4 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
ARHGEF39Q8N4T4 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
ARHGEF39Q8N4T4 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.81■□□□□ 0.28
ARHGEF39Q8N4T4 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ARHGEF39Q8N4T4 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.81■□□□□ 0.28
ARHGEF39Q8N4T4 AF238378.1-201ENST00000526806 358 ntBASIC16.81■□□□□ 0.28
ARHGEF39Q8N4T4 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.81■□□□□ 0.28
ARHGEF39Q8N4T4 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ARHGEF39Q8N4T4 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ARHGEF39Q8N4T4 AC104692.2-201ENST00000603054 253 ntBASIC16.81■□□□□ 0.28
ARHGEF39Q8N4T4 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ARHGEF39Q8N4T4 AP001269.4-201ENST00000609611 512 ntBASIC16.81■□□□□ 0.28
ARHGEF39Q8N4T4 AD001527.2-201ENST00000622994 785 ntBASIC16.81■□□□□ 0.28
ARHGEF39Q8N4T4 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.81■□□□□ 0.28
ARHGEF39Q8N4T4 AP000867.4-201ENST00000641616 219 ntBASIC16.81■□□□□ 0.28
ARHGEF39Q8N4T4 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC16.81■□□□□ 0.28
ARHGEF39Q8N4T4 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
ARHGEF39Q8N4T4 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.81■□□□□ 0.28
ARHGEF39Q8N4T4 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ARHGEF39Q8N4T4 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ARHGEF39Q8N4T4 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
ARHGEF39Q8N4T4 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ARHGEF39Q8N4T4 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ARHGEF39Q8N4T4 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ARHGEF39Q8N4T4 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ARHGEF39Q8N4T4 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
ARHGEF39Q8N4T4 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
ARHGEF39Q8N4T4 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ARHGEF39Q8N4T4 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.8■□□□□ 0.28
ARHGEF39Q8N4T4 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.8■□□□□ 0.28
ARHGEF39Q8N4T4 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ARHGEF39Q8N4T4 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ARHGEF39Q8N4T4 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ARHGEF39Q8N4T4 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ARHGEF39Q8N4T4 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ARHGEF39Q8N4T4 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ARHGEF39Q8N4T4 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ARHGEF39Q8N4T4 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
ARHGEF39Q8N4T4 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.8■□□□□ 0.28
ARHGEF39Q8N4T4 SAPCD2P3-201ENST00000455031 850 ntBASIC16.8■□□□□ 0.28
ARHGEF39Q8N4T4 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.8■□□□□ 0.28
ARHGEF39Q8N4T4 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
ARHGEF39Q8N4T4 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.8■□□□□ 0.28
ARHGEF39Q8N4T4 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.8■□□□□ 0.28
ARHGEF39Q8N4T4 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.8■□□□□ 0.28
ARHGEF39Q8N4T4 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.8■□□□□ 0.28
ARHGEF39Q8N4T4 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms