Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCML4Q8N228 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SCML4Q8N228 ABCD1P5-201ENST00000445663 754 ntBASIC18.53■□□□□ 0.56
SCML4Q8N228 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.53■□□□□ 0.56
SCML4Q8N228 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.53■□□□□ 0.56
SCML4Q8N228 AC106795.1-205ENST00000512851 1056 ntBASIC18.53■□□□□ 0.56
SCML4Q8N228 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.53■□□□□ 0.56
SCML4Q8N228 AC019129.2-201ENST00000609837 1235 ntBASIC18.53■□□□□ 0.56
SCML4Q8N228 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCML4Q8N228 LINC01451-201ENST00000623792 534 ntBASIC18.53■□□□□ 0.56
SCML4Q8N228 AP000867.4-201ENST00000641616 219 ntBASIC18.53■□□□□ 0.56
SCML4Q8N228 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCML4Q8N228 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
SCML4Q8N228 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCML4Q8N228 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.53■□□□□ 0.56
SCML4Q8N228 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
SCML4Q8N228 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.52■□□□□ 0.56
SCML4Q8N228 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.52■□□□□ 0.56
SCML4Q8N228 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
SCML4Q8N228 AL049757.1-201ENST00000616842 1596 ntBASIC18.52■□□□□ 0.56
SCML4Q8N228 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.52■□□□□ 0.56
SCML4Q8N228 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.52■□□□□ 0.56
SCML4Q8N228 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SCML4Q8N228 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
SCML4Q8N228 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.52■□□□□ 0.56
SCML4Q8N228 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
SCML4Q8N228 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.52■□□□□ 0.56
SCML4Q8N228 RBM17P3-201ENST00000417687 1192 ntBASIC18.52■□□□□ 0.56
SCML4Q8N228 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.52■□□□□ 0.56
SCML4Q8N228 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SCML4Q8N228 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.52■□□□□ 0.56
SCML4Q8N228 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.52■□□□□ 0.56
SCML4Q8N228 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.52■□□□□ 0.56
SCML4Q8N228 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.52■□□□□ 0.56
SCML4Q8N228 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SCML4Q8N228 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
SCML4Q8N228 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.52■□□□□ 0.55
SCML4Q8N228 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
SCML4Q8N228 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SCML4Q8N228 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.51■□□□□ 0.55
SCML4Q8N228 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SCML4Q8N228 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.51■□□□□ 0.55
SCML4Q8N228 AKR1C7P-201ENST00000305623 895 ntBASIC18.51■□□□□ 0.55
SCML4Q8N228 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SCML4Q8N228 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SCML4Q8N228 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.51■□□□□ 0.55
SCML4Q8N228 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.51■□□□□ 0.55
SCML4Q8N228 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.51■□□□□ 0.55
SCML4Q8N228 AC132008.2-207ENST00000454517 770 ntBASIC18.51■□□□□ 0.55
SCML4Q8N228 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SCML4Q8N228 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.51■□□□□ 0.55
SCML4Q8N228 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.51■□□□□ 0.55
SCML4Q8N228 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SCML4Q8N228 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
SCML4Q8N228 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.51■□□□□ 0.55
SCML4Q8N228 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.51■□□□□ 0.55
SCML4Q8N228 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SCML4Q8N228 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
SCML4Q8N228 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.51■□□□□ 0.55
SCML4Q8N228 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
SCML4Q8N228 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.5■□□□□ 0.55
SCML4Q8N228 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SCML4Q8N228 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.5■□□□□ 0.55
SCML4Q8N228 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.5■□□□□ 0.55
SCML4Q8N228 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SCML4Q8N228 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.5■□□□□ 0.55
SCML4Q8N228 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.5■□□□□ 0.55
SCML4Q8N228 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SCML4Q8N228 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SCML4Q8N228 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SCML4Q8N228 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.5■□□□□ 0.55
SCML4Q8N228 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
SCML4Q8N228 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.5■□□□□ 0.55
SCML4Q8N228 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SCML4Q8N228 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.5■□□□□ 0.55
SCML4Q8N228 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.5■□□□□ 0.55
SCML4Q8N228 FAAHP1-202ENST00000446499 1238 ntBASIC18.5■□□□□ 0.55
SCML4Q8N228 SAPCD2P3-201ENST00000455031 850 ntBASIC18.5■□□□□ 0.55
SCML4Q8N228 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
SCML4Q8N228 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.5■□□□□ 0.55
SCML4Q8N228 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.5■□□□□ 0.55
SCML4Q8N228 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.5■□□□□ 0.55
SCML4Q8N228 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SCML4Q8N228 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SCML4Q8N228 AL691432.3-201ENST00000621860 400 ntBASIC18.5■□□□□ 0.55
SCML4Q8N228 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
SCML4Q8N228 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SCML4Q8N228 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.5■□□□□ 0.55
SCML4Q8N228 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.5■□□□□ 0.55
SCML4Q8N228 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
SCML4Q8N228 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.5■□□□□ 0.55
SCML4Q8N228 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SCML4Q8N228 PMPCAP1-201ENST00000508114 1576 ntBASIC18.5■□□□□ 0.55
SCML4Q8N228 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SCML4Q8N228 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
SCML4Q8N228 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SCML4Q8N228 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SCML4Q8N228 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
SCML4Q8N228 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.49■□□□□ 0.55
SCML4Q8N228 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms