Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.84■□□□□ 0.45
LDB1Q86U70 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
LDB1Q86U70 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LDB1Q86U70 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
LDB1Q86U70 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.84■□□□□ 0.45
LDB1Q86U70 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LDB1Q86U70 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
LDB1Q86U70 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LDB1Q86U70 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
LDB1Q86U70 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LDB1Q86U70 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
LDB1Q86U70 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
LDB1Q86U70 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LDB1Q86U70 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.83■□□□□ 0.45
LDB1Q86U70 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
LDB1Q86U70 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
LDB1Q86U70 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.83■□□□□ 0.45
LDB1Q86U70 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
LDB1Q86U70 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LDB1Q86U70 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LDB1Q86U70 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.83■□□□□ 0.45
LDB1Q86U70 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.83■□□□□ 0.45
LDB1Q86U70 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LDB1Q86U70 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.83■□□□□ 0.45
LDB1Q86U70 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.83■□□□□ 0.44
LDB1Q86U70 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
LDB1Q86U70 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
LDB1Q86U70 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.83■□□□□ 0.44
LDB1Q86U70 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LDB1Q86U70 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LDB1Q86U70 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.83■□□□□ 0.44
LDB1Q86U70 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
LDB1Q86U70 FAM210CP-201ENST00000445714 574 ntBASIC17.83■□□□□ 0.44
LDB1Q86U70 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.83■□□□□ 0.44
LDB1Q86U70 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LDB1Q86U70 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.83■□□□□ 0.44
LDB1Q86U70 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.83■□□□□ 0.44
LDB1Q86U70 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.83■□□□□ 0.44
LDB1Q86U70 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.83■□□□□ 0.44
LDB1Q86U70 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.83■□□□□ 0.44
LDB1Q86U70 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.83■□□□□ 0.44
LDB1Q86U70 AL390719.2-201ENST00000606993 987 ntBASIC17.83■□□□□ 0.44
LDB1Q86U70 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LDB1Q86U70 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
LDB1Q86U70 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LDB1Q86U70 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LDB1Q86U70 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LDB1Q86U70 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.83■□□□□ 0.44
LDB1Q86U70 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LDB1Q86U70 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.83■□□□□ 0.44
LDB1Q86U70 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LDB1Q86U70 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LDB1Q86U70 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.83■□□□□ 0.44
LDB1Q86U70 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LDB1Q86U70 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
LDB1Q86U70 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LDB1Q86U70 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
LDB1Q86U70 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LDB1Q86U70 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LDB1Q86U70 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
LDB1Q86U70 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.82■□□□□ 0.44
LDB1Q86U70 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
LDB1Q86U70 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LDB1Q86U70 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
LDB1Q86U70 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
LDB1Q86U70 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LDB1Q86U70 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.82■□□□□ 0.44
LDB1Q86U70 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LDB1Q86U70 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LDB1Q86U70 AL049597.2-201ENST00000565575 961 ntBASIC17.82■□□□□ 0.44
LDB1Q86U70 NTF6B-201ENST00000591913 560 ntBASIC17.82■□□□□ 0.44
LDB1Q86U70 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.82■□□□□ 0.44
LDB1Q86U70 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
LDB1Q86U70 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.82■□□□□ 0.44
LDB1Q86U70 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LDB1Q86U70 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
LDB1Q86U70 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LDB1Q86U70 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LDB1Q86U70 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
LDB1Q86U70 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
LDB1Q86U70 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
LDB1Q86U70 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
LDB1Q86U70 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LDB1Q86U70 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LDB1Q86U70 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LDB1Q86U70 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LDB1Q86U70 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LDB1Q86U70 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LDB1Q86U70 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
LDB1Q86U70 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
LDB1Q86U70 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LDB1Q86U70 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.81■□□□□ 0.44
LDB1Q86U70 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LDB1Q86U70 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LDB1Q86U70 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LDB1Q86U70 AL645929.1-201ENST00000420084 975 ntBASIC17.81■□□□□ 0.44
LDB1Q86U70 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.81■□□□□ 0.44
LDB1Q86U70 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.81■□□□□ 0.44
LDB1Q86U70 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.81■□□□□ 0.44
LDB1Q86U70 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms