Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
VPS13CQ709C8 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
VPS13CQ709C8 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
VPS13CQ709C8 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.77□□□□□ -0.05
VPS13CQ709C8 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC14.77□□□□□ -0.05
VPS13CQ709C8 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
VPS13CQ709C8 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
VPS13CQ709C8 AC004877.2-201ENST00000623941 599 ntBASIC14.77□□□□□ -0.05
VPS13CQ709C8 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
VPS13CQ709C8 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.05
VPS13CQ709C8 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC14.77□□□□□ -0.05
VPS13CQ709C8 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
VPS13CQ709C8 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
VPS13CQ709C8 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC14.76□□□□□ -0.05
VPS13CQ709C8 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
VPS13CQ709C8 ANO7L1-203ENST00000602586 1720 ntBASIC14.76□□□□□ -0.05
VPS13CQ709C8 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC14.76□□□□□ -0.05
VPS13CQ709C8 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
VPS13CQ709C8 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
VPS13CQ709C8 MRPL20P1-201ENST00000400819 433 ntBASIC14.76□□□□□ -0.05
VPS13CQ709C8 PAWRP1-201ENST00000451083 565 ntBASIC14.76□□□□□ -0.05
VPS13CQ709C8 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.76□□□□□ -0.05
VPS13CQ709C8 AC010507.1-201ENST00000633895 436 ntBASIC14.76□□□□□ -0.05
VPS13CQ709C8 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
VPS13CQ709C8 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
VPS13CQ709C8 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VPS13CQ709C8 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
VPS13CQ709C8 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
VPS13CQ709C8 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
VPS13CQ709C8 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
VPS13CQ709C8 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
VPS13CQ709C8 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
VPS13CQ709C8 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VPS13CQ709C8 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VPS13CQ709C8 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
VPS13CQ709C8 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
VPS13CQ709C8 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC14.76□□□□□ -0.05
VPS13CQ709C8 MIR661-201ENST00000384842 89 ntBASIC14.76□□□□□ -0.05
VPS13CQ709C8 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
VPS13CQ709C8 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC14.76□□□□□ -0.05
VPS13CQ709C8 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
VPS13CQ709C8 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.76□□□□□ -0.05
VPS13CQ709C8 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.76□□□□□ -0.05
VPS13CQ709C8 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
VPS13CQ709C8 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VPS13CQ709C8 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
VPS13CQ709C8 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VPS13CQ709C8 PHGDH-209ENST00000641074 1780 ntBASIC14.76□□□□□ -0.05
VPS13CQ709C8 AC018445.3-201ENST00000624177 1945 ntBASIC14.76□□□□□ -0.05
VPS13CQ709C8 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
VPS13CQ709C8 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.76□□□□□ -0.05
VPS13CQ709C8 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.76□□□□□ -0.05
VPS13CQ709C8 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
VPS13CQ709C8 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VPS13CQ709C8 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC14.75□□□□□ -0.05
VPS13CQ709C8 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.75□□□□□ -0.05
VPS13CQ709C8 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
VPS13CQ709C8 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
VPS13CQ709C8 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
VPS13CQ709C8 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC14.75□□□□□ -0.05
VPS13CQ709C8 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.75□□□□□ -0.05
VPS13CQ709C8 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
VPS13CQ709C8 MED29-202ENST00000594368 1471 ntTSL 2 BASIC14.75□□□□□ -0.05
VPS13CQ709C8 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC14.75□□□□□ -0.05
VPS13CQ709C8 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VPS13CQ709C8 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
VPS13CQ709C8 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
VPS13CQ709C8 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
VPS13CQ709C8 AC092474.2-201ENST00000424288 719 ntBASIC14.75□□□□□ -0.05
VPS13CQ709C8 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
VPS13CQ709C8 AC093214.1-201ENST00000511688 1107 ntBASIC14.75□□□□□ -0.05
VPS13CQ709C8 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.75□□□□□ -0.05
VPS13CQ709C8 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC14.75□□□□□ -0.05
VPS13CQ709C8 AC051619.7-201ENST00000568314 623 ntBASIC14.75□□□□□ -0.05
VPS13CQ709C8 AL022326.1-202ENST00000641533 845 ntBASIC14.75□□□□□ -0.05
VPS13CQ709C8 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
VPS13CQ709C8 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
VPS13CQ709C8 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
VPS13CQ709C8 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
VPS13CQ709C8 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
VPS13CQ709C8 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VPS13CQ709C8 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VPS13CQ709C8 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC14.75□□□□□ -0.05
VPS13CQ709C8 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
VPS13CQ709C8 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VPS13CQ709C8 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.75□□□□□ -0.05
VPS13CQ709C8 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC14.75□□□□□ -0.05
VPS13CQ709C8 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VPS13CQ709C8 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
VPS13CQ709C8 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC14.74□□□□□ -0.05
VPS13CQ709C8 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC14.74□□□□□ -0.05
VPS13CQ709C8 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
VPS13CQ709C8 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VPS13CQ709C8 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
VPS13CQ709C8 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VPS13CQ709C8 ADM-207ENST00000530439 1839 ntTSL 2 BASIC14.74□□□□□ -0.05
VPS13CQ709C8 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VPS13CQ709C8 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VPS13CQ709C8 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
VPS13CQ709C8 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms