Protein–RNA interactions for Protein: Q12770

SCAP, Sterol regulatory element-binding protein cleavage-activating protein, humanhuman

Predictions only

Length 1,279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPQ12770 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SCAPQ12770 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SCAPQ12770 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SCAPQ12770 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.41■□□□□ 0.54
SCAPQ12770 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.41■□□□□ 0.54
SCAPQ12770 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.41■□□□□ 0.54
SCAPQ12770 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SCAPQ12770 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SCAPQ12770 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SCAPQ12770 BX276092.7-203ENST00000637198 1536 ntBASIC18.41■□□□□ 0.54
SCAPQ12770 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SCAPQ12770 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SCAPQ12770 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.41■□□□□ 0.54
SCAPQ12770 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.41■□□□□ 0.54
SCAPQ12770 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.41■□□□□ 0.54
SCAPQ12770 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
SCAPQ12770 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.41■□□□□ 0.54
SCAPQ12770 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.41■□□□□ 0.54
SCAPQ12770 Z69720.1-201ENST00000601483 472 ntBASIC18.41■□□□□ 0.54
SCAPQ12770 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SCAPQ12770 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
SCAPQ12770 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SCAPQ12770 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SCAPQ12770 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SCAPQ12770 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SCAPQ12770 AC010460.3-201ENST00000511359 1579 ntBASIC18.41■□□□□ 0.54
SCAPQ12770 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SCAPQ12770 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SCAPQ12770 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SCAPQ12770 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SCAPQ12770 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
SCAPQ12770 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCAPQ12770 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
SCAPQ12770 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCAPQ12770 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
SCAPQ12770 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCAPQ12770 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.4■□□□□ 0.54
SCAPQ12770 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SCAPQ12770 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCAPQ12770 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SCAPQ12770 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.4■□□□□ 0.54
SCAPQ12770 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCAPQ12770 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.4■□□□□ 0.54
SCAPQ12770 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.4■□□□□ 0.54
SCAPQ12770 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.4■□□□□ 0.54
SCAPQ12770 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.4■□□□□ 0.54
SCAPQ12770 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.4■□□□□ 0.54
SCAPQ12770 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.4■□□□□ 0.54
SCAPQ12770 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.4■□□□□ 0.54
SCAPQ12770 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.4■□□□□ 0.54
SCAPQ12770 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.4■□□□□ 0.54
SCAPQ12770 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SCAPQ12770 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
SCAPQ12770 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCAPQ12770 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCAPQ12770 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.4■□□□□ 0.54
SCAPQ12770 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCAPQ12770 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SCAPQ12770 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.4■□□□□ 0.54
SCAPQ12770 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCAPQ12770 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SCAPQ12770 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
SCAPQ12770 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
SCAPQ12770 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SCAPQ12770 REXO1L11P-201ENST00000620964 1927 ntBASIC18.39■□□□□ 0.53
SCAPQ12770 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
SCAPQ12770 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SCAPQ12770 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SCAPQ12770 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SCAPQ12770 COX5BP2-201ENST00000392354 334 ntBASIC18.39■□□□□ 0.53
SCAPQ12770 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
SCAPQ12770 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.39■□□□□ 0.53
SCAPQ12770 IGHV3-47-201ENST00000425060 335 ntBASIC18.39■□□□□ 0.53
SCAPQ12770 AC005104.2-201ENST00000427818 678 ntBASIC18.39■□□□□ 0.53
SCAPQ12770 AC007967.3-201ENST00000434308 558 ntBASIC18.39■□□□□ 0.53
SCAPQ12770 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.39■□□□□ 0.53
SCAPQ12770 LINC00265-3P-201ENST00000447588 903 ntBASIC18.39■□□□□ 0.53
SCAPQ12770 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.39■□□□□ 0.53
SCAPQ12770 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SCAPQ12770 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.39■□□□□ 0.53
SCAPQ12770 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.39■□□□□ 0.53
SCAPQ12770 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
SCAPQ12770 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.39■□□□□ 0.53
SCAPQ12770 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.39■□□□□ 0.53
SCAPQ12770 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.39■□□□□ 0.53
SCAPQ12770 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SCAPQ12770 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.39■□□□□ 0.53
SCAPQ12770 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.39■□□□□ 0.53
SCAPQ12770 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SCAPQ12770 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SCAPQ12770 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SCAPQ12770 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.39■□□□□ 0.53
SCAPQ12770 LINC00304-203ENST00000565008 1864 ntBASIC18.39■□□□□ 0.53
SCAPQ12770 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SCAPQ12770 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
SCAPQ12770 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.39■□□□□ 0.53
SCAPQ12770 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.39■□□□□ 0.53
SCAPQ12770 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.38■□□□□ 0.53
SCAPQ12770 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.38■□□□□ 0.53
SCAPQ12770 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms