Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 SPDYE15P-201ENST00000424157 909 ntBASIC16.13■□□□□ 0.17
RPS4XP62701 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.13■□□□□ 0.17
RPS4XP62701 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.13■□□□□ 0.17
RPS4XP62701 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RPS4XP62701 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.13■□□□□ 0.17
RPS4XP62701 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.13■□□□□ 0.17
RPS4XP62701 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RPS4XP62701 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.13■□□□□ 0.17
RPS4XP62701 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
RPS4XP62701 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.13■□□□□ 0.17
RPS4XP62701 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RPS4XP62701 LINC00304-203ENST00000565008 1864 ntBASIC16.13■□□□□ 0.17
RPS4XP62701 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RPS4XP62701 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
RPS4XP62701 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
RPS4XP62701 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RPS4XP62701 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RPS4XP62701 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.13■□□□□ 0.17
RPS4XP62701 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RPS4XP62701 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RPS4XP62701 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.13■□□□□ 0.17
RPS4XP62701 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
RPS4XP62701 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.13■□□□□ 0.17
RPS4XP62701 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.13■□□□□ 0.17
RPS4XP62701 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
RPS4XP62701 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RPS4XP62701 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
RPS4XP62701 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.12■□□□□ 0.17
RPS4XP62701 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
RPS4XP62701 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
RPS4XP62701 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.12■□□□□ 0.17
RPS4XP62701 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.12■□□□□ 0.17
RPS4XP62701 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
RPS4XP62701 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RPS4XP62701 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.12■□□□□ 0.17
RPS4XP62701 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.12■□□□□ 0.17
RPS4XP62701 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
RPS4XP62701 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RPS4XP62701 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.12■□□□□ 0.17
RPS4XP62701 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.12■□□□□ 0.17
RPS4XP62701 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.12■□□□□ 0.17
RPS4XP62701 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RPS4XP62701 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.12■□□□□ 0.17
RPS4XP62701 AC116407.2-201ENST00000613639 860 ntBASIC16.12■□□□□ 0.17
RPS4XP62701 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RPS4XP62701 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.12■□□□□ 0.17
RPS4XP62701 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
RPS4XP62701 SIRPAP1-201ENST00000448467 1770 ntBASIC16.12■□□□□ 0.17
RPS4XP62701 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.12■□□□□ 0.17
RPS4XP62701 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RPS4XP62701 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RPS4XP62701 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RPS4XP62701 AL138688.1-201ENST00000624851 1594 ntBASIC16.12■□□□□ 0.17
RPS4XP62701 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RPS4XP62701 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.12■□□□□ 0.17
RPS4XP62701 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.12■□□□□ 0.17
RPS4XP62701 KRT8P47-201ENST00000604727 1398 ntBASIC16.12■□□□□ 0.17
RPS4XP62701 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.12■□□□□ 0.17
RPS4XP62701 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RPS4XP62701 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RPS4XP62701 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RPS4XP62701 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.11■□□□□ 0.17
RPS4XP62701 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RPS4XP62701 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RPS4XP62701 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RPS4XP62701 AC009949.1-201ENST00000623048 1830 ntBASIC16.11■□□□□ 0.17
RPS4XP62701 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RPS4XP62701 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RPS4XP62701 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.11■□□□□ 0.17
RPS4XP62701 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.11■□□□□ 0.17
RPS4XP62701 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.11■□□□□ 0.17
RPS4XP62701 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.11■□□□□ 0.17
RPS4XP62701 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RPS4XP62701 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RPS4XP62701 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
RPS4XP62701 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.11■□□□□ 0.17
RPS4XP62701 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RPS4XP62701 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.11■□□□□ 0.17
RPS4XP62701 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RPS4XP62701 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.11■□□□□ 0.17
RPS4XP62701 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
RPS4XP62701 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RPS4XP62701 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.11■□□□□ 0.17
RPS4XP62701 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RPS4XP62701 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
RPS4XP62701 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RPS4XP62701 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RPS4XP62701 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RPS4XP62701 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RPS4XP62701 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
RPS4XP62701 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.1■□□□□ 0.17
RPS4XP62701 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.1■□□□□ 0.17
RPS4XP62701 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RPS4XP62701 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
RPS4XP62701 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RPS4XP62701 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RPS4XP62701 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RPS4XP62701 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RPS4XP62701 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RPS4XP62701 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms