Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.78■□□□□ 0.28
RPS3AP61247 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RPS3AP61247 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RPS3AP61247 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.77■□□□□ 0.28
RPS3AP61247 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.77■□□□□ 0.28
RPS3AP61247 AC008556.1-201ENST00000610908 2040 ntBASIC16.77■□□□□ 0.28
RPS3AP61247 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.77■□□□□ 0.28
RPS3AP61247 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.77■□□□□ 0.28
RPS3AP61247 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RPS3AP61247 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RPS3AP61247 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RPS3AP61247 AL499627.1-201ENST00000569373 2188 ntBASIC16.77■□□□□ 0.28
RPS3AP61247 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
RPS3AP61247 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.77■□□□□ 0.28
RPS3AP61247 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RPS3AP61247 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RPS3AP61247 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RPS3AP61247 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RPS3AP61247 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RPS3AP61247 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RPS3AP61247 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RPS3AP61247 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
RPS3AP61247 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.77■□□□□ 0.28
RPS3AP61247 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.77■□□□□ 0.28
RPS3AP61247 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RPS3AP61247 AC063952.2-201ENST00000498792 1227 ntBASIC16.77■□□□□ 0.28
RPS3AP61247 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.77■□□□□ 0.28
RPS3AP61247 AC022616.7-201ENST00000525383 220 ntBASIC16.77■□□□□ 0.28
RPS3AP61247 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
RPS3AP61247 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RPS3AP61247 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.77■□□□□ 0.28
RPS3AP61247 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
RPS3AP61247 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RPS3AP61247 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RPS3AP61247 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
RPS3AP61247 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RPS3AP61247 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.77■□□□□ 0.27
RPS3AP61247 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RPS3AP61247 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RPS3AP61247 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.77■□□□□ 0.27
RPS3AP61247 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RPS3AP61247 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RPS3AP61247 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.77■□□□□ 0.27
RPS3AP61247 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
RPS3AP61247 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.76■□□□□ 0.27
RPS3AP61247 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.76■□□□□ 0.27
RPS3AP61247 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.76■□□□□ 0.27
RPS3AP61247 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RPS3AP61247 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.76■□□□□ 0.27
RPS3AP61247 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RPS3AP61247 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RPS3AP61247 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RPS3AP61247 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RPS3AP61247 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RPS3AP61247 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
RPS3AP61247 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RPS3AP61247 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RPS3AP61247 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RPS3AP61247 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RPS3AP61247 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RPS3AP61247 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RPS3AP61247 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RPS3AP61247 AC034232.1-201ENST00000506026 1064 ntBASIC16.76■□□□□ 0.27
RPS3AP61247 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RPS3AP61247 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.76■□□□□ 0.27
RPS3AP61247 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.76■□□□□ 0.27
RPS3AP61247 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.76■□□□□ 0.27
RPS3AP61247 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RPS3AP61247 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.76■□□□□ 0.27
RPS3AP61247 AC112497.1-201ENST00000624824 639 ntBASIC16.76■□□□□ 0.27
RPS3AP61247 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.76■□□□□ 0.27
RPS3AP61247 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RPS3AP61247 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RPS3AP61247 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
RPS3AP61247 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RPS3AP61247 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
RPS3AP61247 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
RPS3AP61247 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RPS3AP61247 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RPS3AP61247 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.76■□□□□ 0.27
RPS3AP61247 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
RPS3AP61247 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RPS3AP61247 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.76■□□□□ 0.27
RPS3AP61247 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.76■□□□□ 0.27
RPS3AP61247 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RPS3AP61247 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RPS3AP61247 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RPS3AP61247 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
RPS3AP61247 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
RPS3AP61247 AC108860.2-201ENST00000562760 2183 ntBASIC16.75■□□□□ 0.27
RPS3AP61247 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RPS3AP61247 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RPS3AP61247 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.75■□□□□ 0.27
RPS3AP61247 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
RPS3AP61247 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RPS3AP61247 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.75■□□□□ 0.27
RPS3AP61247 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RPS3AP61247 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RPS3AP61247 MIR564-202ENST00000385049 94 ntBASIC16.75■□□□□ 0.27
RPS3AP61247 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms