Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PAX9P55771 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
PAX9P55771 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PAX9P55771 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
PAX9P55771 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PAX9P55771 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
PAX9P55771 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PAX9P55771 AC009949.1-201ENST00000623048 1830 ntBASIC14.34□□□□□ -0.11
PAX9P55771 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
PAX9P55771 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PAX9P55771 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
PAX9P55771 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.11
PAX9P55771 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PAX9P55771 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
PAX9P55771 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PAX9P55771 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC14.33□□□□□ -0.11
PAX9P55771 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
PAX9P55771 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC14.33□□□□□ -0.12
PAX9P55771 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
PAX9P55771 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
PAX9P55771 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC14.33□□□□□ -0.12
PAX9P55771 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PAX9P55771 DOC2GP-204ENST00000639052 2548 ntBASIC14.33□□□□□ -0.12
PAX9P55771 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PAX9P55771 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
PAX9P55771 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PAX9P55771 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PAX9P55771 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
PAX9P55771 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PAX9P55771 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PAX9P55771 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PAX9P55771 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
PAX9P55771 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC14.33□□□□□ -0.12
PAX9P55771 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PAX9P55771 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC14.33□□□□□ -0.12
PAX9P55771 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PAX9P55771 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PAX9P55771 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PAX9P55771 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC14.33□□□□□ -0.12
PAX9P55771 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PAX9P55771 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PAX9P55771 FDX2-206ENST00000492239 773 ntTSL 2 BASIC14.33□□□□□ -0.12
PAX9P55771 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC14.33□□□□□ -0.12
PAX9P55771 TK2-204ENST00000525974 1178 ntTSL 2 BASIC14.33□□□□□ -0.12
PAX9P55771 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC14.33□□□□□ -0.12
PAX9P55771 RPS15-203ENST00000586096 570 ntTSL 2 BASIC14.33□□□□□ -0.12
PAX9P55771 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
PAX9P55771 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PAX9P55771 AC073648.6-201ENST00000641589 218 ntBASIC14.33□□□□□ -0.12
PAX9P55771 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PAX9P55771 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC14.33□□□□□ -0.12
PAX9P55771 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
PAX9P55771 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC14.33□□□□□ -0.12
PAX9P55771 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PAX9P55771 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PAX9P55771 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PAX9P55771 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PAX9P55771 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PAX9P55771 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC14.33□□□□□ -0.12
PAX9P55771 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PAX9P55771 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PAX9P55771 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PAX9P55771 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC14.32□□□□□ -0.12
PAX9P55771 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PAX9P55771 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC14.32□□□□□ -0.12
PAX9P55771 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
PAX9P55771 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
PAX9P55771 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
PAX9P55771 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PAX9P55771 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC14.32□□□□□ -0.12
PAX9P55771 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
PAX9P55771 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
PAX9P55771 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PAX9P55771 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
PAX9P55771 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PAX9P55771 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.32□□□□□ -0.12
PAX9P55771 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
PAX9P55771 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PAX9P55771 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC14.32□□□□□ -0.12
PAX9P55771 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC14.32□□□□□ -0.12
PAX9P55771 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
PAX9P55771 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
PAX9P55771 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC14.32□□□□□ -0.12
PAX9P55771 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC14.32□□□□□ -0.12
PAX9P55771 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PAX9P55771 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PAX9P55771 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
PAX9P55771 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC14.32□□□□□ -0.12
PAX9P55771 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PAX9P55771 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC14.32□□□□□ -0.12
PAX9P55771 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PAX9P55771 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PAX9P55771 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PAX9P55771 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PAX9P55771 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC14.32□□□□□ -0.12
PAX9P55771 LINC00167-201ENST00000530583 1419 ntBASIC14.32□□□□□ -0.12
PAX9P55771 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
PAX9P55771 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC14.32□□□□□ -0.12
PAX9P55771 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
PAX9P55771 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms