Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AC022211.2-201ENST00000585075 2527 ntBASIC16.66■□□□□ 0.26
CDH12P55289 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CDH12P55289 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.66■□□□□ 0.26
CDH12P55289 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH12P55289 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CDH12P55289 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.66■□□□□ 0.26
CDH12P55289 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH12P55289 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.66■□□□□ 0.26
CDH12P55289 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CDH12P55289 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH12P55289 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH12P55289 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CDH12P55289 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH12P55289 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH12P55289 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.65■□□□□ 0.26
CDH12P55289 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH12P55289 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH12P55289 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.65■□□□□ 0.26
CDH12P55289 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.65■□□□□ 0.26
CDH12P55289 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH12P55289 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH12P55289 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH12P55289 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH12P55289 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.65■□□□□ 0.26
CDH12P55289 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.65■□□□□ 0.26
CDH12P55289 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
CDH12P55289 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.65■□□□□ 0.26
CDH12P55289 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH12P55289 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH12P55289 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CDH12P55289 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH12P55289 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH12P55289 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH12P55289 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH12P55289 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH12P55289 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
CDH12P55289 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.65■□□□□ 0.26
CDH12P55289 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.65■□□□□ 0.26
CDH12P55289 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.65■□□□□ 0.26
CDH12P55289 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDH12P55289 AC010240.3-201ENST00000607688 395 ntBASIC16.65■□□□□ 0.26
CDH12P55289 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.65■□□□□ 0.26
CDH12P55289 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH12P55289 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH12P55289 AC100803.2-201ENST00000562459 1963 ntBASIC16.65■□□□□ 0.26
CDH12P55289 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.65■□□□□ 0.26
CDH12P55289 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDH12P55289 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
CDH12P55289 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.65■□□□□ 0.26
CDH12P55289 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH12P55289 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH12P55289 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH12P55289 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH12P55289 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.65■□□□□ 0.26
CDH12P55289 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CDH12P55289 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH12P55289 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.65■□□□□ 0.26
CDH12P55289 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
CDH12P55289 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDH12P55289 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDH12P55289 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.64■□□□□ 0.26
CDH12P55289 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CDH12P55289 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.64■□□□□ 0.25
CDH12P55289 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH12P55289 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH12P55289 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDH12P55289 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDH12P55289 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH12P55289 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CDH12P55289 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.64■□□□□ 0.25
CDH12P55289 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.64■□□□□ 0.25
CDH12P55289 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.64■□□□□ 0.25
CDH12P55289 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC16.64■□□□□ 0.25
CDH12P55289 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.64■□□□□ 0.25
CDH12P55289 FAM87A-204ENST00000613235 858 ntBASIC16.64■□□□□ 0.25
CDH12P55289 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.64■□□□□ 0.25
CDH12P55289 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CDH12P55289 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH12P55289 LINC00602-201ENST00000629776 2065 ntBASIC16.64■□□□□ 0.25
CDH12P55289 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDH12P55289 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDH12P55289 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDH12P55289 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH12P55289 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH12P55289 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDH12P55289 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH12P55289 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CDH12P55289 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH12P55289 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH12P55289 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH12P55289 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH12P55289 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH12P55289 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH12P55289 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.63■□□□□ 0.25
CDH12P55289 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH12P55289 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH12P55289 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH12P55289 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH12P55289 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH12P55289 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms