Protein–RNA interactions for Protein: P51531

SMARCA2, Probable global transcription activator SNF2L2, humanhuman

Predictions only

Length 1,590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2P51531 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC31.43■■■□□ 2.62
SMARCA2P51531 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC31.43■■■□□ 2.62
SMARCA2P51531 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
SMARCA2P51531 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC31.43■■■□□ 2.62
SMARCA2P51531 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC31.43■■■□□ 2.62
SMARCA2P51531 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
SMARCA2P51531 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC31.43■■■□□ 2.62
SMARCA2P51531 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
SMARCA2P51531 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC31.43■■■□□ 2.62
SMARCA2P51531 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC31.43■■■□□ 2.62
SMARCA2P51531 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC31.43■■■□□ 2.62
SMARCA2P51531 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC31.43■■■□□ 2.62
SMARCA2P51531 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC31.43■■■□□ 2.62
SMARCA2P51531 NAA60-208ENST00000570819 833 ntTSL 2 BASIC31.43■■■□□ 2.62
SMARCA2P51531 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC31.42■■■□□ 2.62
SMARCA2P51531 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC31.42■■■□□ 2.62
SMARCA2P51531 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
SMARCA2P51531 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC31.42■■■□□ 2.62
SMARCA2P51531 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC31.42■■■□□ 2.62
SMARCA2P51531 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC31.42■■■□□ 2.62
SMARCA2P51531 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC31.42■■■□□ 2.62
SMARCA2P51531 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC31.42■■■□□ 2.62
SMARCA2P51531 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
SMARCA2P51531 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
SMARCA2P51531 NMU-203ENST00000507338 658 ntTSL 3 BASIC31.42■■■□□ 2.62
SMARCA2P51531 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC31.42■■■□□ 2.62
SMARCA2P51531 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC31.42■■■□□ 2.62
SMARCA2P51531 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
SMARCA2P51531 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC31.42■■■□□ 2.62
SMARCA2P51531 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
SMARCA2P51531 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC31.41■■■□□ 2.62
SMARCA2P51531 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC31.41■■■□□ 2.62
SMARCA2P51531 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
SMARCA2P51531 BAD-202ENST00000394531 631 ntTSL 3 BASIC31.41■■■□□ 2.62
SMARCA2P51531 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC31.41■■■□□ 2.62
SMARCA2P51531 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC31.41■■■□□ 2.62
SMARCA2P51531 RNA5SP421-201ENST00000516864 134 ntBASIC31.41■■■□□ 2.62
SMARCA2P51531 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC31.41■■■□□ 2.62
SMARCA2P51531 ACTL9-202ENST00000612068 1252 ntBASIC31.41■■■□□ 2.62
SMARCA2P51531 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC31.41■■■□□ 2.62
SMARCA2P51531 HFE2-206ENST00000634927 506 ntTSL 4 BASIC31.41■■■□□ 2.62
SMARCA2P51531 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
SMARCA2P51531 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
SMARCA2P51531 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
SMARCA2P51531 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
SMARCA2P51531 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
SMARCA2P51531 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
SMARCA2P51531 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
SMARCA2P51531 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
SMARCA2P51531 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC31.4■■■□□ 2.62
SMARCA2P51531 CNN2P2-201ENST00000443536 909 ntBASIC31.4■■■□□ 2.62
SMARCA2P51531 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC31.4■■■□□ 2.62
SMARCA2P51531 CNN2P3-201ENST00000450201 906 ntBASIC31.4■■■□□ 2.62
SMARCA2P51531 STK19B-204ENST00000512515 211 ntBASIC31.4■■■□□ 2.62
SMARCA2P51531 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC31.4■■■□□ 2.62
SMARCA2P51531 AL136317.3-201ENST00000618497 906 ntBASIC31.4■■■□□ 2.62
SMARCA2P51531 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC31.4■■■□□ 2.62
SMARCA2P51531 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC31.4■■■□□ 2.62
SMARCA2P51531 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC31.4■■■□□ 2.62
SMARCA2P51531 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
SMARCA2P51531 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
SMARCA2P51531 FALEC-201ENST00000416894 566 ntTSL 3 BASIC31.39■■■□□ 2.62
SMARCA2P51531 AC002472.2-201ENST00000442739 958 ntBASIC31.39■■■□□ 2.62
SMARCA2P51531 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC31.39■■■□□ 2.62
SMARCA2P51531 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC31.39■■■□□ 2.62
SMARCA2P51531 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC31.39■■■□□ 2.62
SMARCA2P51531 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC31.39■■■□□ 2.62
SMARCA2P51531 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC31.39■■■□□ 2.62
SMARCA2P51531 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC31.39■■■□□ 2.62
SMARCA2P51531 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
SMARCA2P51531 AC236430.1-201ENST00000402231 743 ntBASIC31.39■■■□□ 2.61
SMARCA2P51531 LINC00982-205ENST00000420957 435 ntBASIC31.39■■■□□ 2.61
SMARCA2P51531 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC31.39■■■□□ 2.61
SMARCA2P51531 ACTG1P4-201ENST00000425123 1122 ntBASIC31.39■■■□□ 2.61
SMARCA2P51531 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC31.39■■■□□ 2.61
SMARCA2P51531 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC31.39■■■□□ 2.61
SMARCA2P51531 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC31.39■■■□□ 2.61
SMARCA2P51531 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC31.39■■■□□ 2.61
SMARCA2P51531 AC109462.3-201ENST00000573934 613 ntBASIC31.39■■■□□ 2.61
SMARCA2P51531 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.61
SMARCA2P51531 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC31.39■■■□□ 2.61
SMARCA2P51531 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC31.38■■■□□ 2.61
SMARCA2P51531 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
SMARCA2P51531 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
SMARCA2P51531 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
SMARCA2P51531 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
SMARCA2P51531 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC31.38■■■□□ 2.61
SMARCA2P51531 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC31.38■■■□□ 2.61
SMARCA2P51531 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC31.38■■■□□ 2.61
SMARCA2P51531 DUX4L27-201ENST00000554796 1261 ntBASIC31.38■■■□□ 2.61
SMARCA2P51531 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
SMARCA2P51531 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC31.38■■■□□ 2.61
SMARCA2P51531 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC31.37■■■□□ 2.61
SMARCA2P51531 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC31.37■■■□□ 2.61
SMARCA2P51531 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC31.37■■■□□ 2.61
SMARCA2P51531 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC31.37■■■□□ 2.61
SMARCA2P51531 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
SMARCA2P51531 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
SMARCA2P51531 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC31.37■■■□□ 2.61
SMARCA2P51531 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC31.37■■■□□ 2.61
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms