Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
PRIM2P49643 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PRIM2P49643 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PRIM2P49643 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PRIM2P49643 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PRIM2P49643 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PRIM2P49643 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PRIM2P49643 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.01■□□□□ 0.31
PRIM2P49643 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PRIM2P49643 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PRIM2P49643 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
PRIM2P49643 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PRIM2P49643 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PRIM2P49643 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.01■□□□□ 0.31
PRIM2P49643 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.01■□□□□ 0.31
PRIM2P49643 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PRIM2P49643 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.01■□□□□ 0.31
PRIM2P49643 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.01■□□□□ 0.31
PRIM2P49643 AC034232.1-201ENST00000506026 1064 ntBASIC17.01■□□□□ 0.31
PRIM2P49643 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.01■□□□□ 0.31
PRIM2P49643 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PRIM2P49643 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.01■□□□□ 0.31
PRIM2P49643 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.01■□□□□ 0.31
PRIM2P49643 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.01■□□□□ 0.31
PRIM2P49643 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PRIM2P49643 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
PRIM2P49643 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PRIM2P49643 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.01■□□□□ 0.31
PRIM2P49643 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
PRIM2P49643 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PRIM2P49643 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.01■□□□□ 0.31
PRIM2P49643 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PRIM2P49643 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PRIM2P49643 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PRIM2P49643 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PRIM2P49643 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PRIM2P49643 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.01■□□□□ 0.31
PRIM2P49643 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17■□□□□ 0.31
PRIM2P49643 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17■□□□□ 0.31
PRIM2P49643 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17■□□□□ 0.31
PRIM2P49643 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
PRIM2P49643 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
PRIM2P49643 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PRIM2P49643 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PRIM2P49643 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
PRIM2P49643 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17■□□□□ 0.31
PRIM2P49643 AC211429.1-201ENST00000415277 523 ntBASIC17■□□□□ 0.31
PRIM2P49643 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17■□□□□ 0.31
PRIM2P49643 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17■□□□□ 0.31
PRIM2P49643 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17■□□□□ 0.31
PRIM2P49643 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17■□□□□ 0.31
PRIM2P49643 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17■□□□□ 0.31
PRIM2P49643 AC140113.3-201ENST00000605663 199 ntBASIC17■□□□□ 0.31
PRIM2P49643 AL024508.2-201ENST00000607749 1894 ntBASIC17■□□□□ 0.31
PRIM2P49643 AC012306.2-201ENST00000609350 630 ntBASIC17■□□□□ 0.31
PRIM2P49643 AC005363.2-201ENST00000618631 242 ntBASIC17■□□□□ 0.31
PRIM2P49643 AL031432.5-201ENST00000641059 760 ntBASIC17■□□□□ 0.31
PRIM2P49643 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17■□□□□ 0.31
PRIM2P49643 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PRIM2P49643 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
PRIM2P49643 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PRIM2P49643 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17■□□□□ 0.31
PRIM2P49643 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
PRIM2P49643 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PRIM2P49643 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
PRIM2P49643 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17■□□□□ 0.31
PRIM2P49643 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PRIM2P49643 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.99■□□□□ 0.31
PRIM2P49643 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PRIM2P49643 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PRIM2P49643 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PRIM2P49643 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PRIM2P49643 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PRIM2P49643 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PRIM2P49643 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PRIM2P49643 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PRIM2P49643 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PRIM2P49643 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PRIM2P49643 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PRIM2P49643 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.99■□□□□ 0.31
PRIM2P49643 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
PRIM2P49643 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
PRIM2P49643 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.99■□□□□ 0.31
PRIM2P49643 AC097493.4-201ENST00000641197 219 ntBASIC16.99■□□□□ 0.31
PRIM2P49643 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.99■□□□□ 0.31
PRIM2P49643 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PRIM2P49643 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.99■□□□□ 0.31
PRIM2P49643 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PRIM2P49643 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.99■□□□□ 0.31
PRIM2P49643 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PRIM2P49643 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PRIM2P49643 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PRIM2P49643 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PRIM2P49643 FER1L4-210ENST00000615531 5998 ntBASIC16.99■□□□□ 0.31
PRIM2P49643 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PRIM2P49643 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.99■□□□□ 0.31
PRIM2P49643 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PRIM2P49643 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PRIM2P49643 AC006116.8-202ENST00000587620 1550 ntBASIC16.98■□□□□ 0.31
PRIM2P49643 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms