Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
SOX2P48431 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.74■□□□□ 0.11
SOX2P48431 CROCCP2-202ENST00000412962 2773 ntBASIC15.74■□□□□ 0.11
SOX2P48431 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC15.74■□□□□ 0.11
SOX2P48431 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
SOX2P48431 AC124067.4-201ENST00000519691 2379 ntBASIC15.73■□□□□ 0.11
SOX2P48431 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SOX2P48431 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
SOX2P48431 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SOX2P48431 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SOX2P48431 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SOX2P48431 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
SOX2P48431 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
SOX2P48431 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
SOX2P48431 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC15.73■□□□□ 0.11
SOX2P48431 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SOX2P48431 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SOX2P48431 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SOX2P48431 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
SOX2P48431 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SOX2P48431 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
SOX2P48431 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SOX2P48431 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SOX2P48431 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.73■□□□□ 0.11
SOX2P48431 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SOX2P48431 PEX7-202ENST00000367756 680 ntTSL 3 BASIC15.73■□□□□ 0.11
SOX2P48431 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
SOX2P48431 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC15.73■□□□□ 0.11
SOX2P48431 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SOX2P48431 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SOX2P48431 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
SOX2P48431 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SOX2P48431 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
SOX2P48431 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SOX2P48431 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SOX2P48431 NKILA-202ENST00000614771 2598 ntBASIC15.73■□□□□ 0.11
SOX2P48431 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
SOX2P48431 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.73■□□□□ 0.11
SOX2P48431 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SOX2P48431 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
SOX2P48431 AC011676.5-201ENST00000624864 2660 ntBASIC15.72■□□□□ 0.11
SOX2P48431 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SOX2P48431 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
SOX2P48431 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SOX2P48431 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SOX2P48431 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SOX2P48431 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SOX2P48431 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
SOX2P48431 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SOX2P48431 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.72■□□□□ 0.11
SOX2P48431 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SOX2P48431 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SOX2P48431 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SOX2P48431 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SOX2P48431 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SOX2P48431 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC15.72■□□□□ 0.11
SOX2P48431 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC15.72■□□□□ 0.11
SOX2P48431 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SOX2P48431 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC15.72■□□□□ 0.11
SOX2P48431 AL355355.2-201ENST00000442321 338 ntBASIC15.72■□□□□ 0.11
SOX2P48431 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
SOX2P48431 AC112497.1-201ENST00000624824 639 ntBASIC15.72■□□□□ 0.11
SOX2P48431 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC15.72■□□□□ 0.11
SOX2P48431 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SOX2P48431 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
SOX2P48431 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SOX2P48431 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.72■□□□□ 0.11
SOX2P48431 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
SOX2P48431 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SOX2P48431 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
SOX2P48431 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SOX2P48431 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
SOX2P48431 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SOX2P48431 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
SOX2P48431 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.72■□□□□ 0.11
SOX2P48431 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
SOX2P48431 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SOX2P48431 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
SOX2P48431 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SOX2P48431 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SOX2P48431 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC15.71■□□□□ 0.11
SOX2P48431 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC15.71■□□□□ 0.11
SOX2P48431 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
SOX2P48431 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SOX2P48431 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SOX2P48431 AC133963.1-201ENST00000504166 1679 ntBASIC15.71■□□□□ 0.11
SOX2P48431 AC132938.6-201ENST00000623828 1655 ntBASIC15.71■□□□□ 0.11
SOX2P48431 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SOX2P48431 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SOX2P48431 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SOX2P48431 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.71■□□□□ 0.11
SOX2P48431 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SOX2P48431 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
SOX2P48431 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SOX2P48431 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
SOX2P48431 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC15.71■□□□□ 0.11
SOX2P48431 KRT18P29-201ENST00000397031 1267 ntBASIC15.71■□□□□ 0.11
SOX2P48431 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC15.71■□□□□ 0.11
SOX2P48431 FAM201B-201ENST00000458407 597 ntBASIC15.71■□□□□ 0.11
SOX2P48431 AC104390.1-201ENST00000555663 520 ntBASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms