Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SSR1P43307 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.01■□□□□ 0.63
SSR1P43307 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SSR1P43307 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SSR1P43307 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SSR1P43307 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SSR1P43307 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SSR1P43307 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SSR1P43307 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.01■□□□□ 0.63
SSR1P43307 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.01■□□□□ 0.63
SSR1P43307 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
SSR1P43307 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.01■□□□□ 0.63
SSR1P43307 AC140113.3-201ENST00000605663 199 ntBASIC19.01■□□□□ 0.63
SSR1P43307 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.01■□□□□ 0.63
SSR1P43307 AC141257.4-201ENST00000634557 245 ntBASIC19.01■□□□□ 0.63
SSR1P43307 AC136944.6-201ENST00000634818 245 ntBASIC19.01■□□□□ 0.63
SSR1P43307 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
SSR1P43307 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
SSR1P43307 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.01■□□□□ 0.63
SSR1P43307 AL391005.1-201ENST00000623953 2435 ntBASIC19.01■□□□□ 0.63
SSR1P43307 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.01■□□□□ 0.63
SSR1P43307 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SSR1P43307 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SSR1P43307 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SSR1P43307 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SSR1P43307 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
SSR1P43307 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SSR1P43307 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SSR1P43307 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC19■□□□□ 0.63
SSR1P43307 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19■□□□□ 0.63
SSR1P43307 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19■□□□□ 0.63
SSR1P43307 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC19■□□□□ 0.63
SSR1P43307 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC19■□□□□ 0.63
SSR1P43307 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
SSR1P43307 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19■□□□□ 0.63
SSR1P43307 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19■□□□□ 0.63
SSR1P43307 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
SSR1P43307 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19■□□□□ 0.63
SSR1P43307 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SSR1P43307 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
SSR1P43307 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19■□□□□ 0.63
SSR1P43307 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19■□□□□ 0.63
SSR1P43307 CD70-202ENST00000423145 881 ntTSL 2 BASIC19■□□□□ 0.63
SSR1P43307 SLC25A6P5-201ENST00000435663 894 ntBASIC19■□□□□ 0.63
SSR1P43307 GXYLT1P3-201ENST00000453058 1193 ntBASIC19■□□□□ 0.63
SSR1P43307 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19■□□□□ 0.63
SSR1P43307 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19■□□□□ 0.63
SSR1P43307 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19■□□□□ 0.63
SSR1P43307 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19■□□□□ 0.63
SSR1P43307 AC133561.5-201ENST00000635547 218 ntBASIC19■□□□□ 0.63
SSR1P43307 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
SSR1P43307 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SSR1P43307 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19■□□□□ 0.63
SSR1P43307 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
SSR1P43307 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SSR1P43307 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SSR1P43307 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC19■□□□□ 0.63
SSR1P43307 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC19■□□□□ 0.63
SSR1P43307 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SSR1P43307 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
SSR1P43307 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.99■□□□□ 0.63
SSR1P43307 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.99■□□□□ 0.63
SSR1P43307 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SSR1P43307 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SSR1P43307 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
SSR1P43307 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SSR1P43307 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
SSR1P43307 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SSR1P43307 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SSR1P43307 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SSR1P43307 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SSR1P43307 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SSR1P43307 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
SSR1P43307 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.99■□□□□ 0.63
SSR1P43307 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SSR1P43307 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.99■□□□□ 0.63
SSR1P43307 AC145285.6-201ENST00000604632 637 ntBASIC18.99■□□□□ 0.63
SSR1P43307 AL023973.1-201ENST00000624619 620 ntBASIC18.99■□□□□ 0.63
SSR1P43307 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.99■□□□□ 0.63
SSR1P43307 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SSR1P43307 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
SSR1P43307 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SSR1P43307 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SSR1P43307 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
SSR1P43307 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
SSR1P43307 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SSR1P43307 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
SSR1P43307 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.98■□□□□ 0.63
SSR1P43307 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SSR1P43307 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC18.98■□□□□ 0.63
SSR1P43307 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.98■□□□□ 0.63
SSR1P43307 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.98■□□□□ 0.63
SSR1P43307 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
SSR1P43307 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SSR1P43307 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
SSR1P43307 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SSR1P43307 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SSR1P43307 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.98■□□□□ 0.63
SSR1P43307 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.98■□□□□ 0.63
SSR1P43307 SLC25A3P1-201ENST00000443844 931 ntBASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms