Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLCN1P35523 AC008040.2-201ENST00000461049 708 ntBASIC20.34■□□□□ 0.85
CLCN1P35523 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.34■□□□□ 0.85
CLCN1P35523 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.34■□□□□ 0.85
CLCN1P35523 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CLCN1P35523 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLCN1P35523 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC20.34■□□□□ 0.85
CLCN1P35523 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
CLCN1P35523 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLCN1P35523 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLCN1P35523 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC20.34■□□□□ 0.85
CLCN1P35523 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLCN1P35523 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLCN1P35523 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CLCN1P35523 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
CLCN1P35523 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLCN1P35523 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CLCN1P35523 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLCN1P35523 WT1-209ENST00000530998 2421 ntTSL 2 BASIC20.33■□□□□ 0.85
CLCN1P35523 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
CLCN1P35523 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
CLCN1P35523 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
CLCN1P35523 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC20.33■□□□□ 0.85
CLCN1P35523 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
CLCN1P35523 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.33■□□□□ 0.85
CLCN1P35523 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.33■□□□□ 0.85
CLCN1P35523 AL158047.1-201ENST00000445918 881 ntBASIC20.33■□□□□ 0.85
CLCN1P35523 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.33■□□□□ 0.85
CLCN1P35523 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.33■□□□□ 0.85
CLCN1P35523 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.33■□□□□ 0.85
CLCN1P35523 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CLCN1P35523 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CLCN1P35523 C1R-202ENST00000536053 2347 ntTSL 2 BASIC20.33■□□□□ 0.84
CLCN1P35523 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CLCN1P35523 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CLCN1P35523 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC20.33■□□□□ 0.84
CLCN1P35523 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.84
CLCN1P35523 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC20.33■□□□□ 0.84
CLCN1P35523 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
CLCN1P35523 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
CLCN1P35523 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
CLCN1P35523 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CLCN1P35523 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
CLCN1P35523 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLCN1P35523 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLCN1P35523 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CLCN1P35523 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLCN1P35523 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLCN1P35523 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC20.32■□□□□ 0.84
CLCN1P35523 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLCN1P35523 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLCN1P35523 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CLCN1P35523 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLCN1P35523 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CLCN1P35523 AC011506.1-201ENST00000474329 610 ntBASIC20.32■□□□□ 0.84
CLCN1P35523 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.32■□□□□ 0.84
CLCN1P35523 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.32■□□□□ 0.84
CLCN1P35523 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.32■□□□□ 0.84
CLCN1P35523 AL031985.4-201ENST00000642138 673 ntBASIC20.32■□□□□ 0.84
CLCN1P35523 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CLCN1P35523 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.32■□□□□ 0.84
CLCN1P35523 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CLCN1P35523 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC20.32■□□□□ 0.84
CLCN1P35523 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CLCN1P35523 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CLCN1P35523 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CLCN1P35523 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC20.32■□□□□ 0.84
CLCN1P35523 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CLCN1P35523 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLCN1P35523 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC20.31■□□□□ 0.84
CLCN1P35523 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CLCN1P35523 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CLCN1P35523 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLCN1P35523 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.31■□□□□ 0.84
CLCN1P35523 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLCN1P35523 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
CLCN1P35523 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLCN1P35523 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLCN1P35523 AC008556.1-201ENST00000610908 2040 ntBASIC20.31■□□□□ 0.84
CLCN1P35523 AL138688.1-201ENST00000624851 1594 ntBASIC20.31■□□□□ 0.84
CLCN1P35523 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLCN1P35523 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLCN1P35523 AC004951.3-201ENST00000418645 1148 ntBASIC20.31■□□□□ 0.84
CLCN1P35523 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.31■□□□□ 0.84
CLCN1P35523 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CLCN1P35523 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
CLCN1P35523 AC130371.2-201ENST00000619443 611 ntBASIC20.31■□□□□ 0.84
CLCN1P35523 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CLCN1P35523 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLCN1P35523 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLCN1P35523 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC20.31■□□□□ 0.84
CLCN1P35523 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLCN1P35523 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CLCN1P35523 HEIH-201ENST00000623091 1652 ntBASIC20.31■□□□□ 0.84
CLCN1P35523 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLCN1P35523 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
CLCN1P35523 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC20.31■□□□□ 0.84
CLCN1P35523 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CLCN1P35523 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC20.31■□□□□ 0.84
CLCN1P35523 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms