Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.76■□□□□ 0.59
MMP8P22894 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.76■□□□□ 0.59
MMP8P22894 AC116407.4-201ENST00000623319 1061 ntBASIC18.76■□□□□ 0.59
MMP8P22894 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MMP8P22894 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.76■□□□□ 0.59
MMP8P22894 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MMP8P22894 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
MMP8P22894 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.76■□□□□ 0.59
MMP8P22894 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
MMP8P22894 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MMP8P22894 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.76■□□□□ 0.59
MMP8P22894 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
MMP8P22894 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.76■□□□□ 0.59
MMP8P22894 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MMP8P22894 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.75■□□□□ 0.59
MMP8P22894 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.75■□□□□ 0.59
MMP8P22894 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
MMP8P22894 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MMP8P22894 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MMP8P22894 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
MMP8P22894 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MMP8P22894 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.75■□□□□ 0.59
MMP8P22894 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MMP8P22894 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MMP8P22894 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
MMP8P22894 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
MMP8P22894 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.75■□□□□ 0.59
MMP8P22894 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
MMP8P22894 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
MMP8P22894 AC124864.1-201ENST00000623408 392 ntBASIC18.75■□□□□ 0.59
MMP8P22894 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MMP8P22894 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MMP8P22894 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MMP8P22894 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.75■□□□□ 0.59
MMP8P22894 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MMP8P22894 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
MMP8P22894 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
MMP8P22894 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
MMP8P22894 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
MMP8P22894 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
MMP8P22894 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
MMP8P22894 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.75■□□□□ 0.59
MMP8P22894 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
MMP8P22894 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
MMP8P22894 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.74■□□□□ 0.59
MMP8P22894 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MMP8P22894 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.74■□□□□ 0.59
MMP8P22894 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.74■□□□□ 0.59
MMP8P22894 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
MMP8P22894 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MMP8P22894 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.74■□□□□ 0.59
MMP8P22894 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MMP8P22894 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MMP8P22894 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
MMP8P22894 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MMP8P22894 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
MMP8P22894 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
MMP8P22894 AL138688.1-201ENST00000624851 1594 ntBASIC18.74■□□□□ 0.59
MMP8P22894 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MMP8P22894 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.74■□□□□ 0.59
MMP8P22894 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.74■□□□□ 0.59
MMP8P22894 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
MMP8P22894 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MMP8P22894 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MMP8P22894 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.74■□□□□ 0.59
MMP8P22894 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
MMP8P22894 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
MMP8P22894 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.74■□□□□ 0.59
MMP8P22894 AC087388.1-201ENST00000571370 1112 ntBASIC18.74■□□□□ 0.59
MMP8P22894 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
MMP8P22894 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
MMP8P22894 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.74■□□□□ 0.59
MMP8P22894 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MMP8P22894 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
MMP8P22894 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MMP8P22894 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
MMP8P22894 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
MMP8P22894 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
MMP8P22894 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
MMP8P22894 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
MMP8P22894 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MMP8P22894 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
MMP8P22894 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
MMP8P22894 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
MMP8P22894 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MMP8P22894 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
MMP8P22894 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
MMP8P22894 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MMP8P22894 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
MMP8P22894 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
MMP8P22894 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
MMP8P22894 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
MMP8P22894 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.73■□□□□ 0.59
MMP8P22894 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
MMP8P22894 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MMP8P22894 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
MMP8P22894 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
MMP8P22894 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MMP8P22894 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MMP8P22894 AC016734.2-201ENST00000624325 1377 ntBASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms