Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TNFRSF1BP20333 LINC00304-203ENST00000565008 1864 ntBASIC16.61■□□□□ 0.25
TNFRSF1BP20333 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.6■□□□□ 0.25
TNFRSF1BP20333 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
TNFRSF1BP20333 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
TNFRSF1BP20333 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TNFRSF1BP20333 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
TNFRSF1BP20333 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.6■□□□□ 0.25
TNFRSF1BP20333 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TNFRSF1BP20333 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TNFRSF1BP20333 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TNFRSF1BP20333 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.6■□□□□ 0.25
TNFRSF1BP20333 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
TNFRSF1BP20333 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
TNFRSF1BP20333 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.6■□□□□ 0.25
TNFRSF1BP20333 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
TNFRSF1BP20333 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
TNFRSF1BP20333 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TNFRSF1BP20333 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.6■□□□□ 0.25
TNFRSF1BP20333 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TNFRSF1BP20333 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC16.6■□□□□ 0.25
TNFRSF1BP20333 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.6■□□□□ 0.25
TNFRSF1BP20333 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.6■□□□□ 0.25
TNFRSF1BP20333 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.6■□□□□ 0.25
TNFRSF1BP20333 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
TNFRSF1BP20333 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.6■□□□□ 0.25
TNFRSF1BP20333 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
TNFRSF1BP20333 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.6■□□□□ 0.25
TNFRSF1BP20333 AC009949.1-201ENST00000623048 1830 ntBASIC16.6■□□□□ 0.25
TNFRSF1BP20333 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TNFRSF1BP20333 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.6■□□□□ 0.25
TNFRSF1BP20333 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TNFRSF1BP20333 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.6■□□□□ 0.25
TNFRSF1BP20333 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.6■□□□□ 0.25
TNFRSF1BP20333 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TNFRSF1BP20333 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TNFRSF1BP20333 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.6■□□□□ 0.25
TNFRSF1BP20333 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TNFRSF1BP20333 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TNFRSF1BP20333 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TNFRSF1BP20333 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.6■□□□□ 0.25
TNFRSF1BP20333 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.59■□□□□ 0.25
TNFRSF1BP20333 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TNFRSF1BP20333 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
TNFRSF1BP20333 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.59■□□□□ 0.25
TNFRSF1BP20333 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TNFRSF1BP20333 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TNFRSF1BP20333 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.59■□□□□ 0.25
TNFRSF1BP20333 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TNFRSF1BP20333 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TNFRSF1BP20333 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.59■□□□□ 0.25
TNFRSF1BP20333 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TNFRSF1BP20333 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
TNFRSF1BP20333 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TNFRSF1BP20333 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.59■□□□□ 0.25
TNFRSF1BP20333 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.59■□□□□ 0.25
TNFRSF1BP20333 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.59■□□□□ 0.25
TNFRSF1BP20333 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.59■□□□□ 0.25
TNFRSF1BP20333 EGLN1P1-201ENST00000531623 762 ntBASIC16.59■□□□□ 0.25
TNFRSF1BP20333 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.59■□□□□ 0.25
TNFRSF1BP20333 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.59■□□□□ 0.25
TNFRSF1BP20333 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TNFRSF1BP20333 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TNFRSF1BP20333 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.59■□□□□ 0.25
TNFRSF1BP20333 AC010947.1-201ENST00000623454 693 ntBASIC16.59■□□□□ 0.25
TNFRSF1BP20333 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
TNFRSF1BP20333 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
TNFRSF1BP20333 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TNFRSF1BP20333 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TNFRSF1BP20333 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TNFRSF1BP20333 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TNFRSF1BP20333 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
TNFRSF1BP20333 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.59■□□□□ 0.25
TNFRSF1BP20333 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TNFRSF1BP20333 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.59■□□□□ 0.25
TNFRSF1BP20333 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TNFRSF1BP20333 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TNFRSF1BP20333 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TNFRSF1BP20333 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TNFRSF1BP20333 AL138688.1-201ENST00000624851 1594 ntBASIC16.59■□□□□ 0.25
TNFRSF1BP20333 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
TNFRSF1BP20333 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.59■□□□□ 0.25
TNFRSF1BP20333 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TNFRSF1BP20333 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.59■□□□□ 0.25
TNFRSF1BP20333 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TNFRSF1BP20333 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.59■□□□□ 0.25
TNFRSF1BP20333 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TNFRSF1BP20333 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TNFRSF1BP20333 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
TNFRSF1BP20333 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
TNFRSF1BP20333 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
TNFRSF1BP20333 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
TNFRSF1BP20333 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.58■□□□□ 0.25
TNFRSF1BP20333 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.58■□□□□ 0.25
TNFRSF1BP20333 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TNFRSF1BP20333 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TNFRSF1BP20333 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TNFRSF1BP20333 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TNFRSF1BP20333 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
TNFRSF1BP20333 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms