Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
COL11A2P13942 CD99-202ENST00000381180 530 ntTSL 2 BASIC21.64■■□□□ 1.06
COL11A2P13942 DDT-204ENST00000404092 805 ntTSL 3 BASIC21.64■■□□□ 1.06
COL11A2P13942 AL627223.1-201ENST00000416693 442 ntBASIC21.64■■□□□ 1.06
COL11A2P13942 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.06
COL11A2P13942 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
COL11A2P13942 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
COL11A2P13942 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC21.64■■□□□ 1.06
COL11A2P13942 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC21.64■■□□□ 1.06
COL11A2P13942 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
COL11A2P13942 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
COL11A2P13942 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
COL11A2P13942 HARS-201ENST00000307633 1780 ntTSL 2 BASIC21.64■■□□□ 1.05
COL11A2P13942 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
COL11A2P13942 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC21.64■■□□□ 1.05
COL11A2P13942 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC21.64■■□□□ 1.05
COL11A2P13942 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
COL11A2P13942 AL590787.1-201ENST00000568856 1315 ntBASIC21.64■■□□□ 1.05
COL11A2P13942 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
COL11A2P13942 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC21.63■■□□□ 1.05
COL11A2P13942 PRR29-209ENST00000582540 967 ntTSL 2 BASIC21.63■■□□□ 1.05
COL11A2P13942 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC21.63■■□□□ 1.05
COL11A2P13942 Z92544.3-201ENST00000624747 417 ntBASIC21.63■■□□□ 1.05
COL11A2P13942 CYP51A1P2-201ENST00000419457 1499 ntBASIC21.63■■□□□ 1.05
COL11A2P13942 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
COL11A2P13942 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
COL11A2P13942 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
COL11A2P13942 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC21.63■■□□□ 1.05
COL11A2P13942 AC097637.2-201ENST00000624096 1997 ntBASIC21.63■■□□□ 1.05
COL11A2P13942 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC21.63■■□□□ 1.05
COL11A2P13942 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC21.63■■□□□ 1.05
COL11A2P13942 AC074386.1-202ENST00000463561 864 ntBASIC21.63■■□□□ 1.05
COL11A2P13942 DUTP2-201ENST00000519164 463 ntBASIC21.63■■□□□ 1.05
COL11A2P13942 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
COL11A2P13942 AC007064.4-201ENST00000637740 555 ntBASIC21.63■■□□□ 1.05
COL11A2P13942 AC009949.1-201ENST00000623048 1830 ntBASIC21.63■■□□□ 1.05
COL11A2P13942 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC21.63■■□□□ 1.05
COL11A2P13942 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
COL11A2P13942 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC21.62■■□□□ 1.05
COL11A2P13942 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.62■■□□□ 1.05
COL11A2P13942 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
COL11A2P13942 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
COL11A2P13942 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
COL11A2P13942 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
COL11A2P13942 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
COL11A2P13942 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC21.62■■□□□ 1.05
COL11A2P13942 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
COL11A2P13942 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC21.62■■□□□ 1.05
COL11A2P13942 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
COL11A2P13942 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
COL11A2P13942 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
COL11A2P13942 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.62■■□□□ 1.05
COL11A2P13942 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
COL11A2P13942 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
COL11A2P13942 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC21.61■■□□□ 1.05
COL11A2P13942 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC21.61■■□□□ 1.05
COL11A2P13942 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
COL11A2P13942 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
COL11A2P13942 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
COL11A2P13942 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC21.61■■□□□ 1.05
COL11A2P13942 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC21.61■■□□□ 1.05
COL11A2P13942 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
COL11A2P13942 CXCL1P1-201ENST00000502804 216 ntBASIC21.61■■□□□ 1.05
COL11A2P13942 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC21.61■■□□□ 1.05
COL11A2P13942 AC004835.2-201ENST00000603762 682 ntBASIC21.61■■□□□ 1.05
COL11A2P13942 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
COL11A2P13942 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
COL11A2P13942 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
COL11A2P13942 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC21.61■■□□□ 1.05
COL11A2P13942 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
COL11A2P13942 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC21.61■■□□□ 1.05
COL11A2P13942 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC21.61■■□□□ 1.05
COL11A2P13942 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC21.61■■□□□ 1.05
COL11A2P13942 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
COL11A2P13942 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
COL11A2P13942 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL11A2P13942 LINC00982-205ENST00000420957 435 ntBASIC21.6■■□□□ 1.05
COL11A2P13942 PNKD-204ENST00000436005 978 ntTSL 5 BASIC21.6■■□□□ 1.05
COL11A2P13942 AC087163.2-201ENST00000457299 853 ntBASIC21.6■■□□□ 1.05
COL11A2P13942 AC093214.1-201ENST00000511688 1107 ntBASIC21.6■■□□□ 1.05
COL11A2P13942 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC21.6■■□□□ 1.05
COL11A2P13942 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC21.6■■□□□ 1.05
COL11A2P13942 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC21.6■■□□□ 1.05
COL11A2P13942 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL11A2P13942 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL11A2P13942 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC21.6■■□□□ 1.05
COL11A2P13942 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
COL11A2P13942 BX276092.7-203ENST00000637198 1536 ntBASIC21.6■■□□□ 1.05
COL11A2P13942 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC21.6■■□□□ 1.05
COL11A2P13942 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
COL11A2P13942 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL11A2P13942 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL11A2P13942 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL11A2P13942 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
COL11A2P13942 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.6■■□□□ 1.05
COL11A2P13942 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL11A2P13942 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
COL11A2P13942 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC21.6■■□□□ 1.05
COL11A2P13942 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL11A2P13942 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms