Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 NCF1C-201ENST00000438382 1427 ntBASIC23.55■■□□□ 1.36
CSB-PGBD3P0DP91 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CSB-PGBD3P0DP91 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CSB-PGBD3P0DP91 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CSB-PGBD3P0DP91 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC23.55■■□□□ 1.36
CSB-PGBD3P0DP91 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC23.55■■□□□ 1.36
CSB-PGBD3P0DP91 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CSB-PGBD3P0DP91 AC126763.1-201ENST00000552015 2118 ntBASIC23.54■■□□□ 1.36
CSB-PGBD3P0DP91 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC23.54■■□□□ 1.36
CSB-PGBD3P0DP91 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CSB-PGBD3P0DP91 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC23.54■■□□□ 1.36
CSB-PGBD3P0DP91 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC23.54■■□□□ 1.36
CSB-PGBD3P0DP91 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC23.54■■□□□ 1.36
CSB-PGBD3P0DP91 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC23.54■■□□□ 1.36
CSB-PGBD3P0DP91 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC23.54■■□□□ 1.36
CSB-PGBD3P0DP91 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC23.54■■□□□ 1.36
CSB-PGBD3P0DP91 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC23.54■■□□□ 1.36
CSB-PGBD3P0DP91 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC23.54■■□□□ 1.36
CSB-PGBD3P0DP91 AC008667.4-201ENST00000607370 168 ntBASIC23.54■■□□□ 1.36
CSB-PGBD3P0DP91 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC23.54■■□□□ 1.36
CSB-PGBD3P0DP91 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC23.54■■□□□ 1.36
CSB-PGBD3P0DP91 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CSB-PGBD3P0DP91 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CSB-PGBD3P0DP91 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC23.54■■□□□ 1.36
CSB-PGBD3P0DP91 AL353593.2-201ENST00000602529 1483 ntBASIC23.54■■□□□ 1.36
CSB-PGBD3P0DP91 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CSB-PGBD3P0DP91 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
CSB-PGBD3P0DP91 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC23.54■■□□□ 1.36
CSB-PGBD3P0DP91 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
CSB-PGBD3P0DP91 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CSB-PGBD3P0DP91 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CSB-PGBD3P0DP91 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC23.53■■□□□ 1.36
CSB-PGBD3P0DP91 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC23.53■■□□□ 1.36
CSB-PGBD3P0DP91 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
CSB-PGBD3P0DP91 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CSB-PGBD3P0DP91 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CSB-PGBD3P0DP91 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CSB-PGBD3P0DP91 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
CSB-PGBD3P0DP91 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CSB-PGBD3P0DP91 KLF4P1-201ENST00000412782 1185 ntBASIC23.53■■□□□ 1.36
CSB-PGBD3P0DP91 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC23.53■■□□□ 1.36
CSB-PGBD3P0DP91 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC23.53■■□□□ 1.36
CSB-PGBD3P0DP91 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
CSB-PGBD3P0DP91 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CSB-PGBD3P0DP91 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC23.53■■□□□ 1.36
CSB-PGBD3P0DP91 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC23.53■■□□□ 1.36
CSB-PGBD3P0DP91 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CSB-PGBD3P0DP91 PHGDH-209ENST00000641074 1780 ntBASIC23.52■■□□□ 1.36
CSB-PGBD3P0DP91 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC23.52■■□□□ 1.36
CSB-PGBD3P0DP91 AC093010.1-201ENST00000473625 1624 ntBASIC23.52■■□□□ 1.36
CSB-PGBD3P0DP91 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CSB-PGBD3P0DP91 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
CSB-PGBD3P0DP91 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
CSB-PGBD3P0DP91 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC23.52■■□□□ 1.36
CSB-PGBD3P0DP91 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
CSB-PGBD3P0DP91 PRSS29P-201ENST00000440800 595 ntBASIC23.52■■□□□ 1.36
CSB-PGBD3P0DP91 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC23.52■■□□□ 1.36
CSB-PGBD3P0DP91 AP002472.1-201ENST00000577490 586 ntBASIC23.52■■□□□ 1.36
CSB-PGBD3P0DP91 MIR3197-201ENST00000582241 73 ntBASIC23.52■■□□□ 1.36
CSB-PGBD3P0DP91 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC23.52■■□□□ 1.36
CSB-PGBD3P0DP91 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC23.52■■□□□ 1.36
CSB-PGBD3P0DP91 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
CSB-PGBD3P0DP91 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC23.52■■□□□ 1.36
CSB-PGBD3P0DP91 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CSB-PGBD3P0DP91 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CSB-PGBD3P0DP91 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CSB-PGBD3P0DP91 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC23.52■■□□□ 1.36
CSB-PGBD3P0DP91 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC23.52■■□□□ 1.36
CSB-PGBD3P0DP91 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC23.52■■□□□ 1.36
CSB-PGBD3P0DP91 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CSB-PGBD3P0DP91 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC23.51■■□□□ 1.35
CSB-PGBD3P0DP91 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CSB-PGBD3P0DP91 ELL2P1-201ENST00000413990 1906 ntBASIC23.51■■□□□ 1.35
CSB-PGBD3P0DP91 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
CSB-PGBD3P0DP91 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CSB-PGBD3P0DP91 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC23.51■■□□□ 1.35
CSB-PGBD3P0DP91 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CSB-PGBD3P0DP91 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC23.51■■□□□ 1.35
CSB-PGBD3P0DP91 AL645939.2-201ENST00000427340 991 ntBASIC23.51■■□□□ 1.35
CSB-PGBD3P0DP91 SIGLEC30P-201ENST00000455569 941 ntBASIC23.51■■□□□ 1.35
CSB-PGBD3P0DP91 S100A2-206ENST00000497140 697 ntTSL 2 BASIC23.51■■□□□ 1.35
CSB-PGBD3P0DP91 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC23.51■■□□□ 1.35
CSB-PGBD3P0DP91 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC23.51■■□□□ 1.35
CSB-PGBD3P0DP91 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC23.51■■□□□ 1.35
CSB-PGBD3P0DP91 AC106028.4-201ENST00000614509 607 ntBASIC23.51■■□□□ 1.35
CSB-PGBD3P0DP91 AL049757.1-201ENST00000616842 1596 ntBASIC23.51■■□□□ 1.35
CSB-PGBD3P0DP91 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC23.51■■□□□ 1.35
CSB-PGBD3P0DP91 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
CSB-PGBD3P0DP91 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CSB-PGBD3P0DP91 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CSB-PGBD3P0DP91 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CSB-PGBD3P0DP91 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
CSB-PGBD3P0DP91 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CSB-PGBD3P0DP91 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
CSB-PGBD3P0DP91 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
CSB-PGBD3P0DP91 MKNK2P1-201ENST00000437526 628 ntBASIC23.5■■□□□ 1.35
CSB-PGBD3P0DP91 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
CSB-PGBD3P0DP91 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC23.5■■□□□ 1.35
CSB-PGBD3P0DP91 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC23.5■■□□□ 1.35
CSB-PGBD3P0DP91 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC23.5■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms