Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LINGO3P0C6S8 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LINGO3P0C6S8 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LINGO3P0C6S8 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LINGO3P0C6S8 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.32■□□□□ 0.36
LINGO3P0C6S8 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.32■□□□□ 0.36
LINGO3P0C6S8 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.32■□□□□ 0.36
LINGO3P0C6S8 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.32■□□□□ 0.36
LINGO3P0C6S8 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.32■□□□□ 0.36
LINGO3P0C6S8 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
LINGO3P0C6S8 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LINGO3P0C6S8 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.32■□□□□ 0.36
LINGO3P0C6S8 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LINGO3P0C6S8 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.32■□□□□ 0.36
LINGO3P0C6S8 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LINGO3P0C6S8 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.32■□□□□ 0.36
LINGO3P0C6S8 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LINGO3P0C6S8 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
LINGO3P0C6S8 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
LINGO3P0C6S8 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
LINGO3P0C6S8 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINGO3P0C6S8 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINGO3P0C6S8 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINGO3P0C6S8 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.31■□□□□ 0.36
LINGO3P0C6S8 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
LINGO3P0C6S8 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINGO3P0C6S8 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINGO3P0C6S8 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINGO3P0C6S8 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
LINGO3P0C6S8 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
LINGO3P0C6S8 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.31■□□□□ 0.36
LINGO3P0C6S8 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LINGO3P0C6S8 RBM17P1-201ENST00000453646 1190 ntBASIC17.31■□□□□ 0.36
LINGO3P0C6S8 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.31■□□□□ 0.36
LINGO3P0C6S8 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
LINGO3P0C6S8 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.31■□□□□ 0.36
LINGO3P0C6S8 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
LINGO3P0C6S8 AL355075.4-201ENST00000554988 638 ntBASIC17.31■□□□□ 0.36
LINGO3P0C6S8 CKBP1-201ENST00000565489 1086 ntBASIC17.31■□□□□ 0.36
LINGO3P0C6S8 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.31■□□□□ 0.36
LINGO3P0C6S8 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINGO3P0C6S8 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINGO3P0C6S8 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.31■□□□□ 0.36
LINGO3P0C6S8 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINGO3P0C6S8 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINGO3P0C6S8 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINGO3P0C6S8 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINGO3P0C6S8 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINGO3P0C6S8 AC093677.2-201ENST00000600169 1863 ntBASIC17.31■□□□□ 0.36
LINGO3P0C6S8 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LINGO3P0C6S8 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LINGO3P0C6S8 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LINGO3P0C6S8 AC096733.2-201ENST00000609937 1394 ntBASIC17.3■□□□□ 0.36
LINGO3P0C6S8 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
LINGO3P0C6S8 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LINGO3P0C6S8 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LINGO3P0C6S8 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LINGO3P0C6S8 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LINGO3P0C6S8 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LINGO3P0C6S8 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.3■□□□□ 0.36
LINGO3P0C6S8 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
LINGO3P0C6S8 UNC93B2-201ENST00000285383 730 ntBASIC17.3■□□□□ 0.36
LINGO3P0C6S8 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
LINGO3P0C6S8 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
LINGO3P0C6S8 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.3■□□□□ 0.36
LINGO3P0C6S8 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.3■□□□□ 0.36
LINGO3P0C6S8 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.3■□□□□ 0.36
LINGO3P0C6S8 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LINGO3P0C6S8 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LINGO3P0C6S8 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.3■□□□□ 0.36
LINGO3P0C6S8 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.3■□□□□ 0.36
LINGO3P0C6S8 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.3■□□□□ 0.36
LINGO3P0C6S8 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
LINGO3P0C6S8 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.3■□□□□ 0.36
LINGO3P0C6S8 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.3■□□□□ 0.36
LINGO3P0C6S8 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LINGO3P0C6S8 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
LINGO3P0C6S8 AC132872.4-202ENST00000622924 2756 ntBASIC17.3■□□□□ 0.36
LINGO3P0C6S8 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.3■□□□□ 0.36
LINGO3P0C6S8 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.3■□□□□ 0.36
LINGO3P0C6S8 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.3■□□□□ 0.36
LINGO3P0C6S8 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LINGO3P0C6S8 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LINGO3P0C6S8 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
LINGO3P0C6S8 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.3■□□□□ 0.36
LINGO3P0C6S8 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LINGO3P0C6S8 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LINGO3P0C6S8 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LINGO3P0C6S8 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
LINGO3P0C6S8 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.3■□□□□ 0.36
LINGO3P0C6S8 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LINGO3P0C6S8 AC106886.4-201ENST00000623557 2502 ntBASIC17.29■□□□□ 0.36
LINGO3P0C6S8 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
LINGO3P0C6S8 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.29■□□□□ 0.36
LINGO3P0C6S8 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LINGO3P0C6S8 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
LINGO3P0C6S8 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
LINGO3P0C6S8 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
LINGO3P0C6S8 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.29■□□□□ 0.36
LINGO3P0C6S8 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms