Protein–RNA interactions for Protein: P07197

NEFM, Neurofilament medium polypeptide, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEFMP07197 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
NEFMP07197 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
NEFMP07197 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC23.84■■□□□ 1.41
NEFMP07197 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
NEFMP07197 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
NEFMP07197 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
NEFMP07197 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
NEFMP07197 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
NEFMP07197 KRT17P6-201ENST00000453795 1220 ntBASIC23.84■■□□□ 1.41
NEFMP07197 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC23.84■■□□□ 1.41
NEFMP07197 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC23.84■■□□□ 1.41
NEFMP07197 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
NEFMP07197 PNN-202ENST00000553331 656 ntTSL 3 BASIC23.84■■□□□ 1.41
NEFMP07197 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC23.84■■□□□ 1.41
NEFMP07197 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
NEFMP07197 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC23.84■■□□□ 1.41
NEFMP07197 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC23.84■■□□□ 1.41
NEFMP07197 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC23.84■■□□□ 1.41
NEFMP07197 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC23.84■■□□□ 1.41
NEFMP07197 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC23.84■■□□□ 1.41
NEFMP07197 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
NEFMP07197 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
NEFMP07197 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC23.84■■□□□ 1.41
NEFMP07197 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
NEFMP07197 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC23.83■■□□□ 1.41
NEFMP07197 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC23.83■■□□□ 1.41
NEFMP07197 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC23.83■■□□□ 1.41
NEFMP07197 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
NEFMP07197 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
NEFMP07197 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC23.83■■□□□ 1.41
NEFMP07197 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC23.83■■□□□ 1.41
NEFMP07197 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
NEFMP07197 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
NEFMP07197 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC23.83■■□□□ 1.41
NEFMP07197 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
NEFMP07197 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
NEFMP07197 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC23.83■■□□□ 1.41
NEFMP07197 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC23.83■■□□□ 1.41
NEFMP07197 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
NEFMP07197 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
NEFMP07197 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC23.83■■□□□ 1.41
NEFMP07197 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
NEFMP07197 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
NEFMP07197 AC093677.2-201ENST00000600169 1863 ntBASIC23.83■■□□□ 1.4
NEFMP07197 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
NEFMP07197 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC23.83■■□□□ 1.4
NEFMP07197 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.4
NEFMP07197 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC23.83■■□□□ 1.4
NEFMP07197 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
NEFMP07197 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC23.83■■□□□ 1.4
NEFMP07197 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
NEFMP07197 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
NEFMP07197 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
NEFMP07197 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC23.82■■□□□ 1.4
NEFMP07197 AL096828.2-201ENST00000567259 1965 ntBASIC23.82■■□□□ 1.4
NEFMP07197 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
NEFMP07197 AC135776.1-201ENST00000319817 2481 ntBASIC23.82■■□□□ 1.4
NEFMP07197 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
NEFMP07197 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
NEFMP07197 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
NEFMP07197 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC23.82■■□□□ 1.4
NEFMP07197 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
NEFMP07197 NUS1P1-201ENST00000446295 882 ntBASIC23.82■■□□□ 1.4
NEFMP07197 MINOS1P3-201ENST00000457048 203 ntBASIC23.82■■□□□ 1.4
NEFMP07197 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
NEFMP07197 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
NEFMP07197 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC23.82■■□□□ 1.4
NEFMP07197 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC23.82■■□□□ 1.4
NEFMP07197 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
NEFMP07197 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
NEFMP07197 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
NEFMP07197 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
NEFMP07197 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
NEFMP07197 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC23.82■■□□□ 1.4
NEFMP07197 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC23.82■■□□□ 1.4
NEFMP07197 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC23.82■■□□□ 1.4
NEFMP07197 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC23.82■■□□□ 1.4
NEFMP07197 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
NEFMP07197 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
NEFMP07197 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC23.82■■□□□ 1.4
NEFMP07197 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
NEFMP07197 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
NEFMP07197 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC23.81■■□□□ 1.4
NEFMP07197 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC23.81■■□□□ 1.4
NEFMP07197 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
NEFMP07197 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
NEFMP07197 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC23.81■■□□□ 1.4
NEFMP07197 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
NEFMP07197 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
NEFMP07197 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC23.81■■□□□ 1.4
NEFMP07197 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
NEFMP07197 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC23.81■■□□□ 1.4
NEFMP07197 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
NEFMP07197 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC23.81■■□□□ 1.4
NEFMP07197 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
NEFMP07197 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
NEFMP07197 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC23.81■■□□□ 1.4
NEFMP07197 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
NEFMP07197 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC23.81■■□□□ 1.4
NEFMP07197 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC23.81■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms