Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.11■□□□□ 0.49
HLA-DQB2P05538 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DQB2P05538 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DQB2P05538 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
HLA-DQB2P05538 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
HLA-DQB2P05538 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DQB2P05538 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.1■□□□□ 0.49
HLA-DQB2P05538 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
HLA-DQB2P05538 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.1■□□□□ 0.49
HLA-DQB2P05538 AL355312.1-201ENST00000407115 2176 ntBASIC18.1■□□□□ 0.49
HLA-DQB2P05538 LINC00896-202ENST00000609602 2128 ntBASIC18.1■□□□□ 0.49
HLA-DQB2P05538 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
HLA-DQB2P05538 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.1■□□□□ 0.49
HLA-DQB2P05538 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.1■□□□□ 0.49
HLA-DQB2P05538 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
HLA-DQB2P05538 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DQB2P05538 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
HLA-DQB2P05538 KRT18P1-202ENST00000452408 1331 ntBASIC18.1■□□□□ 0.49
HLA-DQB2P05538 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.1■□□□□ 0.49
HLA-DQB2P05538 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DQB2P05538 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
HLA-DQB2P05538 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DQB2P05538 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.1■□□□□ 0.49
HLA-DQB2P05538 DDX43P3-201ENST00000441064 443 ntBASIC18.1■□□□□ 0.49
HLA-DQB2P05538 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.1■□□□□ 0.49
HLA-DQB2P05538 AP002414.4-201ENST00000589764 1148 ntBASIC18.1■□□□□ 0.49
HLA-DQB2P05538 AC069148.1-201ENST00000608741 768 ntBASIC18.1■□□□□ 0.49
HLA-DQB2P05538 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DQB2P05538 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DQB2P05538 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DQB2P05538 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DQB2P05538 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
HLA-DQB2P05538 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DQB2P05538 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DQB2P05538 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
HLA-DQB2P05538 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
HLA-DQB2P05538 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
HLA-DQB2P05538 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-DQB2P05538 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-DQB2P05538 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-DQB2P05538 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.09■□□□□ 0.49
HLA-DQB2P05538 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.09■□□□□ 0.49
HLA-DQB2P05538 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.09■□□□□ 0.49
HLA-DQB2P05538 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-DQB2P05538 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-DQB2P05538 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-DQB2P05538 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-DQB2P05538 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.09■□□□□ 0.49
HLA-DQB2P05538 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.09■□□□□ 0.49
HLA-DQB2P05538 TPSP2-201ENST00000561760 610 ntBASIC18.09■□□□□ 0.49
HLA-DQB2P05538 AC011840.4-201ENST00000578471 627 ntBASIC18.09■□□□□ 0.49
HLA-DQB2P05538 AP005901.3-202ENST00000581653 237 ntBASIC18.09■□□□□ 0.49
HLA-DQB2P05538 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
HLA-DQB2P05538 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-DQB2P05538 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.09■□□□□ 0.49
HLA-DQB2P05538 NPAP1P7-201ENST00000613027 823 ntBASIC18.09■□□□□ 0.49
HLA-DQB2P05538 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.09■□□□□ 0.49
HLA-DQB2P05538 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
HLA-DQB2P05538 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-DQB2P05538 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-DQB2P05538 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
HLA-DQB2P05538 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
HLA-DQB2P05538 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-DQB2P05538 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
HLA-DQB2P05538 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
HLA-DQB2P05538 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-DQB2P05538 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
HLA-DQB2P05538 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.09■□□□□ 0.49
HLA-DQB2P05538 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.08■□□□□ 0.49
HLA-DQB2P05538 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.08■□□□□ 0.49
HLA-DQB2P05538 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HLA-DQB2P05538 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
HLA-DQB2P05538 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.08■□□□□ 0.49
HLA-DQB2P05538 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.08■□□□□ 0.49
HLA-DQB2P05538 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.08■□□□□ 0.49
HLA-DQB2P05538 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
HLA-DQB2P05538 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.08■□□□□ 0.48
HLA-DQB2P05538 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HLA-DQB2P05538 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HLA-DQB2P05538 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HLA-DQB2P05538 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HLA-DQB2P05538 AC096633.1-201ENST00000422446 749 ntBASIC18.08■□□□□ 0.48
HLA-DQB2P05538 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.08■□□□□ 0.48
HLA-DQB2P05538 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.08■□□□□ 0.48
HLA-DQB2P05538 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
HLA-DQB2P05538 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.08■□□□□ 0.48
HLA-DQB2P05538 MIR3180-1-201ENST00000580374 94 ntBASIC18.08■□□□□ 0.48
HLA-DQB2P05538 MIR3180-3-201ENST00000584616 94 ntBASIC18.08■□□□□ 0.48
HLA-DQB2P05538 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.08■□□□□ 0.48
HLA-DQB2P05538 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.08■□□□□ 0.48
HLA-DQB2P05538 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
HLA-DQB2P05538 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HLA-DQB2P05538 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HLA-DQB2P05538 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
HLA-DQB2P05538 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HLA-DQB2P05538 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
HLA-DQB2P05538 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
HLA-DQB2P05538 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
HLA-DQB2P05538 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
HLA-DQB2P05538 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms