Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 AC011467.2-201ENST00000598425 242 ntBASIC21.43■■□□□ 1.02
CHGBP05060 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CHGBP05060 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CHGBP05060 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CHGBP05060 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CHGBP05060 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC21.43■■□□□ 1.02
CHGBP05060 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC21.43■■□□□ 1.02
CHGBP05060 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC21.43■■□□□ 1.02
CHGBP05060 AC134043.2-201ENST00000624206 2238 ntBASIC21.43■■□□□ 1.02
CHGBP05060 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CHGBP05060 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
CHGBP05060 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CHGBP05060 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CHGBP05060 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CHGBP05060 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CHGBP05060 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
CHGBP05060 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC21.42■■□□□ 1.02
CHGBP05060 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CHGBP05060 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC21.42■■□□□ 1.02
CHGBP05060 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CHGBP05060 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CHGBP05060 NOC2LP2-201ENST00000407594 1944 ntBASIC21.42■■□□□ 1.02
CHGBP05060 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CHGBP05060 KRT16P4-201ENST00000453883 522 ntBASIC21.42■■□□□ 1.02
CHGBP05060 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CHGBP05060 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC21.42■■□□□ 1.02
CHGBP05060 AC091304.2-201ENST00000564639 760 ntBASIC21.42■■□□□ 1.02
CHGBP05060 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC21.42■■□□□ 1.02
CHGBP05060 RN7SL510P-201ENST00000581311 263 ntBASIC21.42■■□□□ 1.02
CHGBP05060 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC21.42■■□□□ 1.02
CHGBP05060 AC022898.2-201ENST00000616822 1312 ntBASIC21.42■■□□□ 1.02
CHGBP05060 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC21.42■■□□□ 1.02
CHGBP05060 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC21.42■■□□□ 1.02
CHGBP05060 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CHGBP05060 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CHGBP05060 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CHGBP05060 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC21.41■■□□□ 1.02
CHGBP05060 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CHGBP05060 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
CHGBP05060 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
CHGBP05060 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CHGBP05060 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CHGBP05060 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC21.41■■□□□ 1.02
CHGBP05060 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CHGBP05060 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
CHGBP05060 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CHGBP05060 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC21.41■■□□□ 1.02
CHGBP05060 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CHGBP05060 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CHGBP05060 MED16-201ENST00000269814 1199 ntTSL 5 BASIC21.41■■□□□ 1.02
CHGBP05060 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CHGBP05060 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
CHGBP05060 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC21.41■■□□□ 1.02
CHGBP05060 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC21.41■■□□□ 1.02
CHGBP05060 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC21.41■■□□□ 1.02
CHGBP05060 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC21.41■■□□□ 1.02
CHGBP05060 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC21.41■■□□□ 1.02
CHGBP05060 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC21.41■■□□□ 1.02
CHGBP05060 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CHGBP05060 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
CHGBP05060 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC21.41■■□□□ 1.02
CHGBP05060 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
CHGBP05060 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC21.41■■□□□ 1.02
CHGBP05060 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC21.41■■□□□ 1.02
CHGBP05060 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CHGBP05060 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CHGBP05060 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CHGBP05060 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CHGBP05060 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CHGBP05060 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CHGBP05060 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC21.4■■□□□ 1.02
CHGBP05060 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CHGBP05060 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
CHGBP05060 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CHGBP05060 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CHGBP05060 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC21.4■■□□□ 1.02
CHGBP05060 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CHGBP05060 DFFB-203ENST00000341385 572 ntTSL 5 BASIC21.4■■□□□ 1.02
CHGBP05060 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
CHGBP05060 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC21.4■■□□□ 1.02
CHGBP05060 AC079781.3-201ENST00000449110 356 ntBASIC21.4■■□□□ 1.02
CHGBP05060 AC132008.2-207ENST00000454517 770 ntBASIC21.4■■□□□ 1.02
CHGBP05060 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CHGBP05060 AF238378.1-201ENST00000526806 358 ntBASIC21.4■■□□□ 1.02
CHGBP05060 AP001269.4-201ENST00000609611 512 ntBASIC21.4■■□□□ 1.02
CHGBP05060 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC21.4■■□□□ 1.02
CHGBP05060 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CHGBP05060 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CHGBP05060 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CHGBP05060 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC21.4■■□□□ 1.02
CHGBP05060 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CHGBP05060 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CHGBP05060 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
CHGBP05060 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CHGBP05060 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
CHGBP05060 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CHGBP05060 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC21.39■■□□□ 1.02
CHGBP05060 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
CHGBP05060 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CHGBP05060 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms