Protein–RNA interactions for Protein: P04198

MYCN, N-myc proto-oncogene protein, humanhuman

Predicted RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MYCNP04198 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
MYCNP04198 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.48■□□□□ 0.87
MYCNP04198 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC20.48■□□□□ 0.87
MYCNP04198 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
MYCNP04198 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
MYCNP04198 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.48■□□□□ 0.87
MYCNP04198 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
MYCNP04198 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.48■□□□□ 0.87
MYCNP04198 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
MYCNP04198 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
MYCNP04198 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
MYCNP04198 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
MYCNP04198 H3F3A-203ENST00000366815 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
MYCNP04198 MTCYBP11-201ENST00000447254 1109 ntBASIC20.48■□□□□ 0.87
MYCNP04198 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC20.48■□□□□ 0.87
MYCNP04198 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC20.48■□□□□ 0.87
MYCNP04198 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC20.48■□□□□ 0.87
MYCNP04198 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC20.48■□□□□ 0.87
MYCNP04198 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC20.48■□□□□ 0.87
MYCNP04198 AL691403.2-201ENST00000618460 490 ntBASIC20.48■□□□□ 0.87
MYCNP04198 AC116407.3-201ENST00000623905 1129 ntBASIC20.48■□□□□ 0.87
MYCNP04198 CAND2-206ENST00000626378 333 ntTSL 5 BASIC20.48■□□□□ 0.87
MYCNP04198 FAM215A-202ENST00000632077 792 ntBASIC20.48■□□□□ 0.87
MYCNP04198 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.48■□□□□ 0.87
MYCNP04198 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
MYCNP04198 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
MYCNP04198 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
MYCNP04198 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
MYCNP04198 TP73-AS1-210ENST00000637775 1455 ntBASIC20.48■□□□□ 0.87
MYCNP04198 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.48■□□□□ 0.87
MYCNP04198 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
MYCNP04198 AC020763.4-201ENST00000623414 4170 ntBASIC20.48■□□□□ 0.87
MYCNP04198 AC125437.2-201ENST00000625180 2167 ntBASIC20.48■□□□□ 0.87
MYCNP04198 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
MYCNP04198 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
MYCNP04198 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
MYCNP04198 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.48■□□□□ 0.87
MYCNP04198 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.48■□□□□ 0.87
MYCNP04198 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
MYCNP04198 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC20.47■□□□□ 0.87
MYCNP04198 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.47■□□□□ 0.87
MYCNP04198 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC20.47■□□□□ 0.87
MYCNP04198 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
MYCNP04198 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
MYCNP04198 AC073987.1-201ENST00000422683 638 ntTSL 3 BASIC20.47■□□□□ 0.87
MYCNP04198 HNRNPDP1-201ENST00000439535 754 ntBASIC20.47■□□□□ 0.87
MYCNP04198 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
MYCNP04198 AC018712.1-201ENST00000455767 687 ntBASIC20.47■□□□□ 0.87
MYCNP04198 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC20.47■□□□□ 0.87
MYCNP04198 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC20.47■□□□□ 0.87
MYCNP04198 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC20.47■□□□□ 0.87
MYCNP04198 ZNF826P-202ENST00000542380 1067 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
MYCNP04198 AC023968.2-201ENST00000560593 1049 ntBASIC20.47■□□□□ 0.87
MYCNP04198 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC20.47■□□□□ 0.87
MYCNP04198 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.47■□□□□ 0.87
MYCNP04198 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
MYCNP04198 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
MYCNP04198 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
MYCNP04198 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
MYCNP04198 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.47■□□□□ 0.87
MYCNP04198 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
MYCNP04198 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
MYCNP04198 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
MYCNP04198 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
MYCNP04198 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.46■□□□□ 0.87
MYCNP04198 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
MYCNP04198 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MYCNP04198 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MYCNP04198 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
MYCNP04198 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
MYCNP04198 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.46■□□□□ 0.87
MYCNP04198 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MYCNP04198 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
MYCNP04198 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MYCNP04198 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MYCNP04198 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
MYCNP04198 MED16-201ENST00000269814 1199 ntTSL 5 BASIC20.46■□□□□ 0.87
MYCNP04198 ETFRF1-201ENST00000381356 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
MYCNP04198 VN1R11P-201ENST00000407795 868 ntBASIC20.46■□□□□ 0.87
MYCNP04198 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC20.46■□□□□ 0.87
MYCNP04198 Z97198.1-201ENST00000452366 658 ntTSL 2 BASIC20.46■□□□□ 0.87
MYCNP04198 PPP1R26-AS1-201ENST00000455039 643 ntTSL 4 BASIC20.46■□□□□ 0.87
MYCNP04198 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
MYCNP04198 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC20.46■□□□□ 0.87
MYCNP04198 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC20.46■□□□□ 0.87
MYCNP04198 AC087273.2-201ENST00000519038 634 ntTSL 3 BASIC20.46■□□□□ 0.87
MYCNP04198 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC20.46■□□□□ 0.87
MYCNP04198 AC012181.2-201ENST00000570210 699 ntBASIC20.46■□□□□ 0.87
MYCNP04198 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC20.46■□□□□ 0.87
MYCNP04198 AL355877.3-201ENST00000622820 899 ntBASIC20.46■□□□□ 0.87
MYCNP04198 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
MYCNP04198 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
MYCNP04198 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MYCNP04198 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MYCNP04198 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
MYCNP04198 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
MYCNP04198 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
MYCNP04198 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.46■□□□□ 0.87
MYCNP04198 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
MYCNP04198 AC104581.1-202ENST00000635932 2618 ntBASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms