Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.71■□□□□ 0.59
TRUB2O95900 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.71■□□□□ 0.59
TRUB2O95900 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRUB2O95900 AC011840.4-201ENST00000578471 627 ntBASIC18.71■□□□□ 0.59
TRUB2O95900 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.71■□□□□ 0.59
TRUB2O95900 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.71■□□□□ 0.59
TRUB2O95900 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRUB2O95900 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.71■□□□□ 0.59
TRUB2O95900 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.71■□□□□ 0.59
TRUB2O95900 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRUB2O95900 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
TRUB2O95900 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
TRUB2O95900 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.71■□□□□ 0.59
TRUB2O95900 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.71■□□□□ 0.59
TRUB2O95900 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRUB2O95900 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRUB2O95900 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
TRUB2O95900 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.7■□□□□ 0.58
TRUB2O95900 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRUB2O95900 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRUB2O95900 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRUB2O95900 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.7■□□□□ 0.58
TRUB2O95900 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
TRUB2O95900 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRUB2O95900 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
TRUB2O95900 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRUB2O95900 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRUB2O95900 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRUB2O95900 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRUB2O95900 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRUB2O95900 HCG4P8-203ENST00000443049 980 ntBASIC18.7■□□□□ 0.58
TRUB2O95900 LINC00265-3P-201ENST00000447588 903 ntBASIC18.7■□□□□ 0.58
TRUB2O95900 TOB2P1-201ENST00000469761 992 ntBASIC18.7■□□□□ 0.58
TRUB2O95900 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.7■□□□□ 0.58
TRUB2O95900 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.7■□□□□ 0.58
TRUB2O95900 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.7■□□□□ 0.58
TRUB2O95900 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.7■□□□□ 0.58
TRUB2O95900 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.7■□□□□ 0.58
TRUB2O95900 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.7■□□□□ 0.58
TRUB2O95900 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.7■□□□□ 0.58
TRUB2O95900 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRUB2O95900 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRUB2O95900 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
TRUB2O95900 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRUB2O95900 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.7■□□□□ 0.58
TRUB2O95900 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRUB2O95900 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
TRUB2O95900 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.7■□□□□ 0.58
TRUB2O95900 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRUB2O95900 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRUB2O95900 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TRUB2O95900 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.69■□□□□ 0.58
TRUB2O95900 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRUB2O95900 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRUB2O95900 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRUB2O95900 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.69■□□□□ 0.58
TRUB2O95900 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TRUB2O95900 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
TRUB2O95900 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRUB2O95900 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.69■□□□□ 0.58
TRUB2O95900 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRUB2O95900 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.69■□□□□ 0.58
TRUB2O95900 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.69■□□□□ 0.58
TRUB2O95900 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.69■□□□□ 0.58
TRUB2O95900 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.69■□□□□ 0.58
TRUB2O95900 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.69■□□□□ 0.58
TRUB2O95900 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRUB2O95900 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.69■□□□□ 0.58
TRUB2O95900 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRUB2O95900 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRUB2O95900 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TRUB2O95900 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TRUB2O95900 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.69■□□□□ 0.58
TRUB2O95900 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRUB2O95900 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.68■□□□□ 0.58
TRUB2O95900 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRUB2O95900 AC233702.3-201ENST00000578656 1387 ntBASIC18.68■□□□□ 0.58
TRUB2O95900 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRUB2O95900 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRUB2O95900 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRUB2O95900 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRUB2O95900 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRUB2O95900 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.68■□□□□ 0.58
TRUB2O95900 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRUB2O95900 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.68■□□□□ 0.58
TRUB2O95900 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
TRUB2O95900 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRUB2O95900 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRUB2O95900 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRUB2O95900 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
TRUB2O95900 AC246785.2-201ENST00000432512 513 ntBASIC18.68■□□□□ 0.58
TRUB2O95900 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
TRUB2O95900 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRUB2O95900 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.68■□□□□ 0.58
TRUB2O95900 AC091607.1-201ENST00000490318 1060 ntBASIC18.68■□□□□ 0.58
TRUB2O95900 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.68■□□□□ 0.58
TRUB2O95900 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRUB2O95900 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRUB2O95900 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRUB2O95900 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms