Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HOXA2O43364 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.02■□□□□ 0.64
HOXA2O43364 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HOXA2O43364 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HOXA2O43364 FUT8-AS1-201ENST00000621019 1521 ntBASIC19.02■□□□□ 0.64
HOXA2O43364 BX276092.7-203ENST00000637198 1536 ntBASIC19.02■□□□□ 0.64
HOXA2O43364 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
HOXA2O43364 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC19.02■□□□□ 0.64
HOXA2O43364 HNRNPA1P28-201ENST00000424481 961 ntBASIC19.02■□□□□ 0.64
HOXA2O43364 S100A2-206ENST00000497140 697 ntTSL 2 BASIC19.02■□□□□ 0.64
HOXA2O43364 AL096828.2-201ENST00000567259 1965 ntBASIC19.02■□□□□ 0.64
HOXA2O43364 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
HOXA2O43364 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
HOXA2O43364 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
HOXA2O43364 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.02■□□□□ 0.63
HOXA2O43364 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
HOXA2O43364 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HOXA2O43364 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HOXA2O43364 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HOXA2O43364 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
HOXA2O43364 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.01■□□□□ 0.63
HOXA2O43364 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HOXA2O43364 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HOXA2O43364 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
HOXA2O43364 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC19.01■□□□□ 0.63
HOXA2O43364 DDX43P3-201ENST00000441064 443 ntBASIC19.01■□□□□ 0.63
HOXA2O43364 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC19.01■□□□□ 0.63
HOXA2O43364 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC19.01■□□□□ 0.63
HOXA2O43364 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC19.01■□□□□ 0.63
HOXA2O43364 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC19.01■□□□□ 0.63
HOXA2O43364 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC19.01■□□□□ 0.63
HOXA2O43364 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
HOXA2O43364 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC19.01■□□□□ 0.63
HOXA2O43364 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HOXA2O43364 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC19.01■□□□□ 0.63
HOXA2O43364 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC19.01■□□□□ 0.63
HOXA2O43364 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC19■□□□□ 0.63
HOXA2O43364 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
HOXA2O43364 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HOXA2O43364 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
HOXA2O43364 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
HOXA2O43364 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC19■□□□□ 0.63
HOXA2O43364 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC19■□□□□ 0.63
HOXA2O43364 FIS1-203ENST00000442303 631 ntTSL 3 BASIC19■□□□□ 0.63
HOXA2O43364 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC19■□□□□ 0.63
HOXA2O43364 AC112482.1-201ENST00000492080 688 ntBASIC19■□□□□ 0.63
HOXA2O43364 IGHV3-52-201ENST00000519770 353 ntBASIC19■□□□□ 0.63
HOXA2O43364 DHDH-204ENST00000523250 634 ntTSL 5 BASIC19■□□□□ 0.63
HOXA2O43364 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC19■□□□□ 0.63
HOXA2O43364 CYB561-217ENST00000582997 877 ntTSL 5 BASIC19■□□□□ 0.63
HOXA2O43364 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC19■□□□□ 0.63
HOXA2O43364 AC055717.3-201ENST00000622967 595 ntBASIC19■□□□□ 0.63
HOXA2O43364 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HOXA2O43364 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HOXA2O43364 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19■□□□□ 0.63
HOXA2O43364 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19■□□□□ 0.63
HOXA2O43364 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HOXA2O43364 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HOXA2O43364 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HOXA2O43364 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HOXA2O43364 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HOXA2O43364 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
HOXA2O43364 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HOXA2O43364 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC19■□□□□ 0.63
HOXA2O43364 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HOXA2O43364 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HOXA2O43364 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HOXA2O43364 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.99■□□□□ 0.63
HOXA2O43364 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
HOXA2O43364 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HOXA2O43364 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.99■□□□□ 0.63
HOXA2O43364 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
HOXA2O43364 COA5-202ENST00000409997 557 ntTSL 4 BASIC18.99■□□□□ 0.63
HOXA2O43364 CRYGEP-201ENST00000412192 528 ntBASIC18.99■□□□□ 0.63
HOXA2O43364 ELK2BP-201ENST00000415014 1224 ntBASIC18.99■□□□□ 0.63
HOXA2O43364 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC18.99■□□□□ 0.63
HOXA2O43364 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
HOXA2O43364 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC18.99■□□□□ 0.63
HOXA2O43364 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.99■□□□□ 0.63
HOXA2O43364 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18.99■□□□□ 0.63
HOXA2O43364 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.99■□□□□ 0.63
HOXA2O43364 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC18.99■□□□□ 0.63
HOXA2O43364 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.99■□□□□ 0.63
HOXA2O43364 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.99■□□□□ 0.63
HOXA2O43364 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.99■□□□□ 0.63
HOXA2O43364 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.99■□□□□ 0.63
HOXA2O43364 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
HOXA2O43364 AC018445.3-201ENST00000624177 1945 ntBASIC18.99■□□□□ 0.63
HOXA2O43364 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HOXA2O43364 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
HOXA2O43364 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HOXA2O43364 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.99■□□□□ 0.63
HOXA2O43364 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HOXA2O43364 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
HOXA2O43364 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
HOXA2O43364 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HOXA2O43364 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.98■□□□□ 0.63
HOXA2O43364 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
HOXA2O43364 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HOXA2O43364 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms