Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.04■□□□□ 0.64
O00370 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.04■□□□□ 0.64
O00370 AC112698.1-201ENST00000510299 916 ntBASIC19.04■□□□□ 0.64
O00370 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
O00370 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19.04■□□□□ 0.64
O00370 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
O00370 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
O00370 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
O00370 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
O00370 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
O00370 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
O00370 KRT8P47-201ENST00000604727 1398 ntBASIC19.04■□□□□ 0.64
O00370 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
O00370 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
O00370 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
O00370 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.04■□□□□ 0.64
O00370 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
O00370 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
O00370 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
O00370 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
O00370 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
O00370 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.03■□□□□ 0.64
O00370 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
O00370 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
O00370 EML3-212ENST00000494176 2901 ntTSL 2 BASIC19.03■□□□□ 0.64
O00370 EML3-216ENST00000529309 2909 ntTSL 2 BASIC19.03■□□□□ 0.64
O00370 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC19.03■□□□□ 0.64
O00370 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
O00370 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
O00370 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
O00370 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
O00370 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
O00370 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
O00370 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
O00370 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.03■□□□□ 0.64
O00370 AC069148.1-201ENST00000608741 768 ntBASIC19.03■□□□□ 0.64
O00370 AL353801.3-201ENST00000609898 542 ntBASIC19.03■□□□□ 0.64
O00370 IGHV3-41-201ENST00000613121 348 ntBASIC19.03■□□□□ 0.64
O00370 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.03■□□□□ 0.64
O00370 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
O00370 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC19.03■□□□□ 0.64
O00370 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
O00370 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
O00370 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
O00370 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
O00370 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
O00370 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.02■□□□□ 0.64
O00370 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
O00370 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
O00370 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
O00370 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
O00370 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
O00370 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
O00370 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
O00370 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
O00370 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
O00370 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
O00370 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
O00370 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
O00370 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
O00370 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
O00370 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
O00370 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
O00370 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
O00370 SLC25A6P5-201ENST00000435663 894 ntBASIC19.02■□□□□ 0.64
O00370 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
O00370 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.02■□□□□ 0.64
O00370 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.02■□□□□ 0.64
O00370 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.02■□□□□ 0.64
O00370 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.02■□□□□ 0.64
O00370 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
O00370 LINC00896-202ENST00000609602 2128 ntBASIC19.02■□□□□ 0.64
O00370 NPAP1P7-201ENST00000613027 823 ntBASIC19.02■□□□□ 0.64
O00370 AC124864.1-201ENST00000623408 392 ntBASIC19.02■□□□□ 0.64
O00370 AC139713.2-201ENST00000641328 2723 ntBASIC19.02■□□□□ 0.64
O00370 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
O00370 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
O00370 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
O00370 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
O00370 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
O00370 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
O00370 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
O00370 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
O00370 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
O00370 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
O00370 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
O00370 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.01■□□□□ 0.63
O00370 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
O00370 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC19.01■□□□□ 0.63
O00370 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
O00370 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
O00370 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
O00370 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
O00370 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
O00370 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.01■□□□□ 0.63
O00370 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.01■□□□□ 0.63
O00370 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
O00370 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
O00370 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
O00370 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms