Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
MEIS3P1A6NDR6 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MEIS3P1A6NDR6 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
MEIS3P1A6NDR6 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
MEIS3P1A6NDR6 AC106886.4-201ENST00000623557 2502 ntBASIC15.35■□□□□ 0.05
MEIS3P1A6NDR6 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MEIS3P1A6NDR6 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
MEIS3P1A6NDR6 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MEIS3P1A6NDR6 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.34■□□□□ 0.05
MEIS3P1A6NDR6 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
MEIS3P1A6NDR6 PCDHB19P-201ENST00000570871 2371 ntBASIC15.34■□□□□ 0.05
MEIS3P1A6NDR6 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MEIS3P1A6NDR6 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
MEIS3P1A6NDR6 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
MEIS3P1A6NDR6 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
MEIS3P1A6NDR6 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
MEIS3P1A6NDR6 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.34■□□□□ 0.05
MEIS3P1A6NDR6 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MEIS3P1A6NDR6 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC15.34■□□□□ 0.05
MEIS3P1A6NDR6 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.34■□□□□ 0.05
MEIS3P1A6NDR6 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
MEIS3P1A6NDR6 AL138688.1-201ENST00000624851 1594 ntBASIC15.34■□□□□ 0.05
MEIS3P1A6NDR6 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC15.34■□□□□ 0.05
MEIS3P1A6NDR6 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.34■□□□□ 0.05
MEIS3P1A6NDR6 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
MEIS3P1A6NDR6 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
MEIS3P1A6NDR6 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC15.34■□□□□ 0.05
MEIS3P1A6NDR6 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.34■□□□□ 0.05
MEIS3P1A6NDR6 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.34■□□□□ 0.05
MEIS3P1A6NDR6 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MEIS3P1A6NDR6 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
MEIS3P1A6NDR6 KRT16P1-201ENST00000399124 1418 ntBASIC15.34■□□□□ 0.05
MEIS3P1A6NDR6 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MEIS3P1A6NDR6 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
MEIS3P1A6NDR6 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.33■□□□□ 0.05
MEIS3P1A6NDR6 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
MEIS3P1A6NDR6 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
MEIS3P1A6NDR6 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.33■□□□□ 0.05
MEIS3P1A6NDR6 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
MEIS3P1A6NDR6 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
MEIS3P1A6NDR6 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC15.33■□□□□ 0.04
MEIS3P1A6NDR6 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MEIS3P1A6NDR6 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
MEIS3P1A6NDR6 AC133963.1-201ENST00000504166 1679 ntBASIC15.33■□□□□ 0.04
MEIS3P1A6NDR6 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
MEIS3P1A6NDR6 KSR1P1-201ENST00000446298 240 ntBASIC15.33■□□□□ 0.04
MEIS3P1A6NDR6 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC15.33■□□□□ 0.04
MEIS3P1A6NDR6 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC15.33■□□□□ 0.04
MEIS3P1A6NDR6 AC124016.1-201ENST00000609552 612 ntBASIC15.33■□□□□ 0.04
MEIS3P1A6NDR6 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
MEIS3P1A6NDR6 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
MEIS3P1A6NDR6 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
MEIS3P1A6NDR6 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
MEIS3P1A6NDR6 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MEIS3P1A6NDR6 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
MEIS3P1A6NDR6 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
MEIS3P1A6NDR6 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
MEIS3P1A6NDR6 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
MEIS3P1A6NDR6 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
MEIS3P1A6NDR6 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
MEIS3P1A6NDR6 AC046158.3-201ENST00000624947 2558 ntBASIC15.32■□□□□ 0.04
MEIS3P1A6NDR6 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MEIS3P1A6NDR6 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
MEIS3P1A6NDR6 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.32■□□□□ 0.04
MEIS3P1A6NDR6 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
MEIS3P1A6NDR6 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC15.32■□□□□ 0.04
MEIS3P1A6NDR6 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
MEIS3P1A6NDR6 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MEIS3P1A6NDR6 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MEIS3P1A6NDR6 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
MEIS3P1A6NDR6 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
MEIS3P1A6NDR6 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
MEIS3P1A6NDR6 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MEIS3P1A6NDR6 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MEIS3P1A6NDR6 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.32■□□□□ 0.04
MEIS3P1A6NDR6 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MEIS3P1A6NDR6 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MEIS3P1A6NDR6 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
MEIS3P1A6NDR6 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MEIS3P1A6NDR6 AC011506.1-201ENST00000474329 610 ntBASIC15.32■□□□□ 0.04
MEIS3P1A6NDR6 RNA5SP413-201ENST00000516373 109 ntBASIC15.32■□□□□ 0.04
MEIS3P1A6NDR6 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.32■□□□□ 0.04
MEIS3P1A6NDR6 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
MEIS3P1A6NDR6 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MEIS3P1A6NDR6 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MEIS3P1A6NDR6 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.32■□□□□ 0.04
MEIS3P1A6NDR6 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MEIS3P1A6NDR6 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.32■□□□□ 0.04
MEIS3P1A6NDR6 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MEIS3P1A6NDR6 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MEIS3P1A6NDR6 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MEIS3P1A6NDR6 PCDHA14-201ENST00000506751 2298 ntBASIC15.32■□□□□ 0.04
MEIS3P1A6NDR6 CYP51A1P1-201ENST00000492267 1507 ntBASIC15.32■□□□□ 0.04
MEIS3P1A6NDR6 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MEIS3P1A6NDR6 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MEIS3P1A6NDR6 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
MEIS3P1A6NDR6 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MEIS3P1A6NDR6 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
MEIS3P1A6NDR6 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MEIS3P1A6NDR6 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms