Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TCRBV4S1A1TA0A5B7 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
TCRBV4S1A1TA0A5B7 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC14.39□□□□□ -0.11
TCRBV4S1A1TA0A5B7 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC14.39□□□□□ -0.11
TCRBV4S1A1TA0A5B7 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
TCRBV4S1A1TA0A5B7 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
TCRBV4S1A1TA0A5B7 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
TCRBV4S1A1TA0A5B7 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TCRBV4S1A1TA0A5B7 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TCRBV4S1A1TA0A5B7 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TCRBV4S1A1TA0A5B7 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TCRBV4S1A1TA0A5B7 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC14.38□□□□□ -0.11
TCRBV4S1A1TA0A5B7 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
TCRBV4S1A1TA0A5B7 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TCRBV4S1A1TA0A5B7 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC14.38□□□□□ -0.11
TCRBV4S1A1TA0A5B7 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
TCRBV4S1A1TA0A5B7 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TCRBV4S1A1TA0A5B7 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TCRBV4S1A1TA0A5B7 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TCRBV4S1A1TA0A5B7 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TCRBV4S1A1TA0A5B7 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC14.38□□□□□ -0.11
TCRBV4S1A1TA0A5B7 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TCRBV4S1A1TA0A5B7 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TCRBV4S1A1TA0A5B7 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
TCRBV4S1A1TA0A5B7 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC14.38□□□□□ -0.11
TCRBV4S1A1TA0A5B7 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
TCRBV4S1A1TA0A5B7 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC14.38□□□□□ -0.11
TCRBV4S1A1TA0A5B7 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TCRBV4S1A1TA0A5B7 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TCRBV4S1A1TA0A5B7 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
TCRBV4S1A1TA0A5B7 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TCRBV4S1A1TA0A5B7 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TCRBV4S1A1TA0A5B7 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
TCRBV4S1A1TA0A5B7 MIR662-201ENST00000384847 95 ntBASIC14.38□□□□□ -0.11
TCRBV4S1A1TA0A5B7 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
TCRBV4S1A1TA0A5B7 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TCRBV4S1A1TA0A5B7 AL450487.1-201ENST00000426799 995 ntBASIC14.38□□□□□ -0.11
TCRBV4S1A1TA0A5B7 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC14.38□□□□□ -0.11
TCRBV4S1A1TA0A5B7 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TCRBV4S1A1TA0A5B7 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC14.38□□□□□ -0.11
TCRBV4S1A1TA0A5B7 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC14.38□□□□□ -0.11
TCRBV4S1A1TA0A5B7 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC14.38□□□□□ -0.11
TCRBV4S1A1TA0A5B7 MIR3180-4-201ENST00000582223 153 ntBASIC14.38□□□□□ -0.11
TCRBV4S1A1TA0A5B7 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC14.38□□□□□ -0.11
TCRBV4S1A1TA0A5B7 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC14.38□□□□□ -0.11
TCRBV4S1A1TA0A5B7 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC14.38□□□□□ -0.11
TCRBV4S1A1TA0A5B7 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TCRBV4S1A1TA0A5B7 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC14.38□□□□□ -0.11
TCRBV4S1A1TA0A5B7 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
TCRBV4S1A1TA0A5B7 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TCRBV4S1A1TA0A5B7 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TCRBV4S1A1TA0A5B7 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TCRBV4S1A1TA0A5B7 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC14.38□□□□□ -0.11
TCRBV4S1A1TA0A5B7 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TCRBV4S1A1TA0A5B7 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TCRBV4S1A1TA0A5B7 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
TCRBV4S1A1TA0A5B7 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
TCRBV4S1A1TA0A5B7 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TCRBV4S1A1TA0A5B7 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TCRBV4S1A1TA0A5B7 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TCRBV4S1A1TA0A5B7 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC14.38□□□□□ -0.11
TCRBV4S1A1TA0A5B7 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
TCRBV4S1A1TA0A5B7 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC14.37□□□□□ -0.11
TCRBV4S1A1TA0A5B7 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TCRBV4S1A1TA0A5B7 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TCRBV4S1A1TA0A5B7 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
TCRBV4S1A1TA0A5B7 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC14.37□□□□□ -0.11
TCRBV4S1A1TA0A5B7 AC016734.2-201ENST00000624325 1377 ntBASIC14.37□□□□□ -0.11
TCRBV4S1A1TA0A5B7 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
TCRBV4S1A1TA0A5B7 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TCRBV4S1A1TA0A5B7 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC14.37□□□□□ -0.11
TCRBV4S1A1TA0A5B7 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TCRBV4S1A1TA0A5B7 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC14.37□□□□□ -0.11
TCRBV4S1A1TA0A5B7 CYP51A1P1-201ENST00000492267 1507 ntBASIC14.37□□□□□ -0.11
TCRBV4S1A1TA0A5B7 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TCRBV4S1A1TA0A5B7 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TCRBV4S1A1TA0A5B7 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
TCRBV4S1A1TA0A5B7 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC14.37□□□□□ -0.11
TCRBV4S1A1TA0A5B7 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
TCRBV4S1A1TA0A5B7 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
TCRBV4S1A1TA0A5B7 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TCRBV4S1A1TA0A5B7 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TCRBV4S1A1TA0A5B7 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TCRBV4S1A1TA0A5B7 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC14.37□□□□□ -0.11
TCRBV4S1A1TA0A5B7 AP003733.1-201ENST00000491725 852 ntBASIC14.37□□□□□ -0.11
TCRBV4S1A1TA0A5B7 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
TCRBV4S1A1TA0A5B7 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC14.37□□□□□ -0.11
TCRBV4S1A1TA0A5B7 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC14.37□□□□□ -0.11
TCRBV4S1A1TA0A5B7 PRELID1P1-202ENST00000567272 903 ntBASIC14.37□□□□□ -0.11
TCRBV4S1A1TA0A5B7 MNT-208ENST00000575394 606 ntTSL 4 BASIC14.37□□□□□ -0.11
TCRBV4S1A1TA0A5B7 AL691432.3-201ENST00000621860 400 ntBASIC14.37□□□□□ -0.11
TCRBV4S1A1TA0A5B7 FZD10-202ENST00000539839 3282 ntBASIC14.37□□□□□ -0.11
TCRBV4S1A1TA0A5B7 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TCRBV4S1A1TA0A5B7 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TCRBV4S1A1TA0A5B7 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
TCRBV4S1A1TA0A5B7 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
TCRBV4S1A1TA0A5B7 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC14.37□□□□□ -0.11
TCRBV4S1A1TA0A5B7 KRT18P1-202ENST00000452408 1331 ntBASIC14.37□□□□□ -0.11
TCRBV4S1A1TA0A5B7 PBK-203ENST00000522944 1499 ntTSL 2 BASIC14.37□□□□□ -0.11
TCRBV4S1A1TA0A5B7 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms