Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
DDX49Q9Y6V7 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
DDX49Q9Y6V7 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
DDX49Q9Y6V7 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC21.49■■□□□ 1.03
DDX49Q9Y6V7 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
DDX49Q9Y6V7 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
DDX49Q9Y6V7 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
DDX49Q9Y6V7 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
DDX49Q9Y6V7 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
DDX49Q9Y6V7 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
DDX49Q9Y6V7 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
DDX49Q9Y6V7 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC21.49■■□□□ 1.03
DDX49Q9Y6V7 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
DDX49Q9Y6V7 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
DDX49Q9Y6V7 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC21.49■■□□□ 1.03
DDX49Q9Y6V7 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
DDX49Q9Y6V7 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
DDX49Q9Y6V7 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
DDX49Q9Y6V7 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
DDX49Q9Y6V7 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
DDX49Q9Y6V7 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
DDX49Q9Y6V7 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
DDX49Q9Y6V7 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC21.48■■□□□ 1.03
DDX49Q9Y6V7 AC124067.4-201ENST00000519691 2379 ntBASIC21.48■■□□□ 1.03
DDX49Q9Y6V7 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC21.48■■□□□ 1.03
DDX49Q9Y6V7 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC21.48■■□□□ 1.03
DDX49Q9Y6V7 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC21.48■■□□□ 1.03
DDX49Q9Y6V7 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
DDX49Q9Y6V7 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC21.48■■□□□ 1.03
DDX49Q9Y6V7 KATNBL1P6-202ENST00000562413 1466 ntBASIC21.48■■□□□ 1.03
DDX49Q9Y6V7 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
DDX49Q9Y6V7 STARP1-201ENST00000397973 869 ntBASIC21.48■■□□□ 1.03
DDX49Q9Y6V7 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
DDX49Q9Y6V7 DUSP5P1-201ENST00000441325 1139 ntBASIC21.48■■□□□ 1.03
DDX49Q9Y6V7 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC21.48■■□□□ 1.03
DDX49Q9Y6V7 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC21.48■■□□□ 1.03
DDX49Q9Y6V7 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
DDX49Q9Y6V7 ZNF444P1-201ENST00000559497 298 ntBASIC21.48■■□□□ 1.03
DDX49Q9Y6V7 NEK4P2-201ENST00000580004 1012 ntBASIC21.48■■□□□ 1.03
DDX49Q9Y6V7 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC21.48■■□□□ 1.03
DDX49Q9Y6V7 NDUFV2-AS1-203ENST00000608008 779 ntBASIC21.48■■□□□ 1.03
DDX49Q9Y6V7 AC012313.10-201ENST00000623509 926 ntBASIC21.48■■□□□ 1.03
DDX49Q9Y6V7 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
DDX49Q9Y6V7 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
DDX49Q9Y6V7 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
DDX49Q9Y6V7 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC21.48■■□□□ 1.03
DDX49Q9Y6V7 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
DDX49Q9Y6V7 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
DDX49Q9Y6V7 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC21.48■■□□□ 1.03
DDX49Q9Y6V7 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
DDX49Q9Y6V7 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
DDX49Q9Y6V7 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
DDX49Q9Y6V7 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
DDX49Q9Y6V7 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC21.47■■□□□ 1.03
DDX49Q9Y6V7 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC21.47■■□□□ 1.03
DDX49Q9Y6V7 AC112777.1-201ENST00000540175 1423 ntBASIC21.47■■□□□ 1.03
DDX49Q9Y6V7 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
DDX49Q9Y6V7 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
DDX49Q9Y6V7 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
DDX49Q9Y6V7 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
DDX49Q9Y6V7 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
DDX49Q9Y6V7 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
DDX49Q9Y6V7 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
DDX49Q9Y6V7 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
DDX49Q9Y6V7 GAD2-202ENST00000376248 680 ntTSL 5 BASIC21.47■■□□□ 1.03
DDX49Q9Y6V7 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC21.47■■□□□ 1.03
DDX49Q9Y6V7 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
DDX49Q9Y6V7 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC21.47■■□□□ 1.03
DDX49Q9Y6V7 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
DDX49Q9Y6V7 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC21.47■■□□□ 1.03
DDX49Q9Y6V7 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
DDX49Q9Y6V7 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
DDX49Q9Y6V7 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
DDX49Q9Y6V7 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
DDX49Q9Y6V7 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
DDX49Q9Y6V7 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
DDX49Q9Y6V7 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
DDX49Q9Y6V7 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
DDX49Q9Y6V7 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
DDX49Q9Y6V7 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC21.47■■□□□ 1.03
DDX49Q9Y6V7 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC21.47■■□□□ 1.03
DDX49Q9Y6V7 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
DDX49Q9Y6V7 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
DDX49Q9Y6V7 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC21.47■■□□□ 1.03
DDX49Q9Y6V7 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC21.47■■□□□ 1.03
DDX49Q9Y6V7 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
DDX49Q9Y6V7 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC21.46■■□□□ 1.03
DDX49Q9Y6V7 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
DDX49Q9Y6V7 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
DDX49Q9Y6V7 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
DDX49Q9Y6V7 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
DDX49Q9Y6V7 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
DDX49Q9Y6V7 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
DDX49Q9Y6V7 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
DDX49Q9Y6V7 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC21.46■■□□□ 1.03
DDX49Q9Y6V7 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
DDX49Q9Y6V7 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC21.46■■□□□ 1.03
DDX49Q9Y6V7 AL136038.3-201ENST00000561909 1096 ntBASIC21.46■■□□□ 1.03
DDX49Q9Y6V7 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC21.46■■□□□ 1.03
DDX49Q9Y6V7 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms