Protein–RNA interactions for Protein: Q9Y4B5

MTCL1, Microtubule cross-linking factor 1, humanhuman

Known RBP Predictions only

Length 1,905 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1Q9Y4B5 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MTCL1Q9Y4B5 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MTCL1Q9Y4B5 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MTCL1Q9Y4B5 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.44■□□□□ 0.54
MTCL1Q9Y4B5 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
MTCL1Q9Y4B5 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MTCL1Q9Y4B5 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MTCL1Q9Y4B5 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MTCL1Q9Y4B5 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC18.44■□□□□ 0.54
MTCL1Q9Y4B5 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MTCL1Q9Y4B5 AC009336.1-201ENST00000608941 1553 ntBASIC18.44■□□□□ 0.54
MTCL1Q9Y4B5 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MTCL1Q9Y4B5 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MTCL1Q9Y4B5 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
MTCL1Q9Y4B5 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
MTCL1Q9Y4B5 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
MTCL1Q9Y4B5 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.44■□□□□ 0.54
MTCL1Q9Y4B5 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.43■□□□□ 0.54
MTCL1Q9Y4B5 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
MTCL1Q9Y4B5 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
MTCL1Q9Y4B5 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
MTCL1Q9Y4B5 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
MTCL1Q9Y4B5 AC005829.1-201ENST00000570002 483 ntBASIC18.43■□□□□ 0.54
MTCL1Q9Y4B5 AC027612.4-201ENST00000605371 583 ntBASIC18.43■□□□□ 0.54
MTCL1Q9Y4B5 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.43■□□□□ 0.54
MTCL1Q9Y4B5 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MTCL1Q9Y4B5 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
MTCL1Q9Y4B5 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
MTCL1Q9Y4B5 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
MTCL1Q9Y4B5 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
MTCL1Q9Y4B5 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
MTCL1Q9Y4B5 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
MTCL1Q9Y4B5 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MTCL1Q9Y4B5 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
MTCL1Q9Y4B5 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.43■□□□□ 0.54
MTCL1Q9Y4B5 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC18.43■□□□□ 0.54
MTCL1Q9Y4B5 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC18.43■□□□□ 0.54
MTCL1Q9Y4B5 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MTCL1Q9Y4B5 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MTCL1Q9Y4B5 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MTCL1Q9Y4B5 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
MTCL1Q9Y4B5 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MTCL1Q9Y4B5 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MTCL1Q9Y4B5 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
MTCL1Q9Y4B5 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
MTCL1Q9Y4B5 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.42■□□□□ 0.54
MTCL1Q9Y4B5 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
MTCL1Q9Y4B5 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MTCL1Q9Y4B5 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
MTCL1Q9Y4B5 ADH5P3-201ENST00000433842 1137 ntBASIC18.42■□□□□ 0.54
MTCL1Q9Y4B5 YBX1P5-201ENST00000509441 847 ntBASIC18.42■□□□□ 0.54
MTCL1Q9Y4B5 AP000344.2-201ENST00000512987 629 ntBASIC18.42■□□□□ 0.54
MTCL1Q9Y4B5 MIR4751-201ENST00000578027 74 ntBASIC18.42■□□□□ 0.54
MTCL1Q9Y4B5 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.42■□□□□ 0.54
MTCL1Q9Y4B5 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC18.42■□□□□ 0.54
MTCL1Q9Y4B5 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.42■□□□□ 0.54
MTCL1Q9Y4B5 AL590787.1-201ENST00000568856 1315 ntBASIC18.42■□□□□ 0.54
MTCL1Q9Y4B5 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MTCL1Q9Y4B5 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MTCL1Q9Y4B5 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
MTCL1Q9Y4B5 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
MTCL1Q9Y4B5 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MTCL1Q9Y4B5 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.42■□□□□ 0.54
MTCL1Q9Y4B5 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.42■□□□□ 0.54
MTCL1Q9Y4B5 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MTCL1Q9Y4B5 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.42■□□□□ 0.54
MTCL1Q9Y4B5 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MTCL1Q9Y4B5 AC003669.1-201ENST00000334569 611 ntBASIC18.41■□□□□ 0.54
MTCL1Q9Y4B5 RHOQP3-201ENST00000437982 621 ntBASIC18.41■□□□□ 0.54
MTCL1Q9Y4B5 SIGLEC30P-201ENST00000455569 941 ntBASIC18.41■□□□□ 0.54
MTCL1Q9Y4B5 AL513190.1-201ENST00000621254 727 ntBASIC18.41■□□□□ 0.54
MTCL1Q9Y4B5 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
MTCL1Q9Y4B5 ELL2P1-201ENST00000413990 1906 ntBASIC18.41■□□□□ 0.54
MTCL1Q9Y4B5 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MTCL1Q9Y4B5 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MTCL1Q9Y4B5 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MTCL1Q9Y4B5 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
MTCL1Q9Y4B5 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
MTCL1Q9Y4B5 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
MTCL1Q9Y4B5 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.41■□□□□ 0.54
MTCL1Q9Y4B5 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC18.41■□□□□ 0.54
MTCL1Q9Y4B5 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MTCL1Q9Y4B5 COX5BP2-201ENST00000392354 334 ntBASIC18.41■□□□□ 0.54
MTCL1Q9Y4B5 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC18.41■□□□□ 0.54
MTCL1Q9Y4B5 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC18.41■□□□□ 0.54
MTCL1Q9Y4B5 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC18.41■□□□□ 0.54
MTCL1Q9Y4B5 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC18.41■□□□□ 0.54
MTCL1Q9Y4B5 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC18.41■□□□□ 0.54
MTCL1Q9Y4B5 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.41■□□□□ 0.54
MTCL1Q9Y4B5 GGTLC5P-201ENST00000617623 998 ntBASIC18.41■□□□□ 0.54
MTCL1Q9Y4B5 C20orf181-201ENST00000623918 480 ntBASIC18.41■□□□□ 0.54
MTCL1Q9Y4B5 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.4■□□□□ 0.54
MTCL1Q9Y4B5 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
MTCL1Q9Y4B5 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MTCL1Q9Y4B5 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MTCL1Q9Y4B5 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
MTCL1Q9Y4B5 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.4■□□□□ 0.54
MTCL1Q9Y4B5 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MTCL1Q9Y4B5 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MTCL1Q9Y4B5 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms