Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.56■□□□□ 0.56
AP4E1Q9UPM8 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.56■□□□□ 0.56
AP4E1Q9UPM8 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
AP4E1Q9UPM8 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.56■□□□□ 0.56
AP4E1Q9UPM8 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
AP4E1Q9UPM8 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
AP4E1Q9UPM8 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
AP4E1Q9UPM8 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
AP4E1Q9UPM8 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.56■□□□□ 0.56
AP4E1Q9UPM8 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
AP4E1Q9UPM8 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.56■□□□□ 0.56
AP4E1Q9UPM8 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
AP4E1Q9UPM8 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
AP4E1Q9UPM8 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
AP4E1Q9UPM8 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.56■□□□□ 0.56
AP4E1Q9UPM8 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.56■□□□□ 0.56
AP4E1Q9UPM8 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
AP4E1Q9UPM8 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
AP4E1Q9UPM8 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
AP4E1Q9UPM8 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.56■□□□□ 0.56
AP4E1Q9UPM8 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.56■□□□□ 0.56
AP4E1Q9UPM8 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
AP4E1Q9UPM8 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
AP4E1Q9UPM8 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
AP4E1Q9UPM8 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
AP4E1Q9UPM8 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
AP4E1Q9UPM8 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
AP4E1Q9UPM8 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.55■□□□□ 0.56
AP4E1Q9UPM8 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
AP4E1Q9UPM8 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.55■□□□□ 0.56
AP4E1Q9UPM8 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.55■□□□□ 0.56
AP4E1Q9UPM8 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.55■□□□□ 0.56
AP4E1Q9UPM8 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.55■□□□□ 0.56
AP4E1Q9UPM8 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
AP4E1Q9UPM8 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
AP4E1Q9UPM8 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.55■□□□□ 0.56
AP4E1Q9UPM8 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
AP4E1Q9UPM8 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
AP4E1Q9UPM8 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.55■□□□□ 0.56
AP4E1Q9UPM8 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.55■□□□□ 0.56
AP4E1Q9UPM8 KRT18P35-201ENST00000510488 1269 ntBASIC18.55■□□□□ 0.56
AP4E1Q9UPM8 GUSBP12-201ENST00000513727 720 ntBASIC18.55■□□□□ 0.56
AP4E1Q9UPM8 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
AP4E1Q9UPM8 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
AP4E1Q9UPM8 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
AP4E1Q9UPM8 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
AP4E1Q9UPM8 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.55■□□□□ 0.56
AP4E1Q9UPM8 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
AP4E1Q9UPM8 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
AP4E1Q9UPM8 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
AP4E1Q9UPM8 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
AP4E1Q9UPM8 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.55■□□□□ 0.56
AP4E1Q9UPM8 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
AP4E1Q9UPM8 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
AP4E1Q9UPM8 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
AP4E1Q9UPM8 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
AP4E1Q9UPM8 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.55■□□□□ 0.56
AP4E1Q9UPM8 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
AP4E1Q9UPM8 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
AP4E1Q9UPM8 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
AP4E1Q9UPM8 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.54■□□□□ 0.56
AP4E1Q9UPM8 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
AP4E1Q9UPM8 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
AP4E1Q9UPM8 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.54■□□□□ 0.56
AP4E1Q9UPM8 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.54■□□□□ 0.56
AP4E1Q9UPM8 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.54■□□□□ 0.56
AP4E1Q9UPM8 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
AP4E1Q9UPM8 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
AP4E1Q9UPM8 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
AP4E1Q9UPM8 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
AP4E1Q9UPM8 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.54■□□□□ 0.56
AP4E1Q9UPM8 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
AP4E1Q9UPM8 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
AP4E1Q9UPM8 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.54■□□□□ 0.56
AP4E1Q9UPM8 PCED1CP-201ENST00000419887 785 ntBASIC18.54■□□□□ 0.56
AP4E1Q9UPM8 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.54■□□□□ 0.56
AP4E1Q9UPM8 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
AP4E1Q9UPM8 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
AP4E1Q9UPM8 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.54■□□□□ 0.56
AP4E1Q9UPM8 KRT8P26-201ENST00000534154 1276 ntBASIC18.54■□□□□ 0.56
AP4E1Q9UPM8 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.54■□□□□ 0.56
AP4E1Q9UPM8 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.54■□□□□ 0.56
AP4E1Q9UPM8 AC116407.4-201ENST00000623319 1061 ntBASIC18.54■□□□□ 0.56
AP4E1Q9UPM8 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.54■□□□□ 0.56
AP4E1Q9UPM8 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
AP4E1Q9UPM8 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
AP4E1Q9UPM8 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
AP4E1Q9UPM8 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.54■□□□□ 0.56
AP4E1Q9UPM8 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.54■□□□□ 0.56
AP4E1Q9UPM8 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
AP4E1Q9UPM8 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
AP4E1Q9UPM8 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
AP4E1Q9UPM8 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
AP4E1Q9UPM8 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
AP4E1Q9UPM8 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
AP4E1Q9UPM8 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
AP4E1Q9UPM8 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
AP4E1Q9UPM8 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
AP4E1Q9UPM8 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
AP4E1Q9UPM8 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms