Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
DNMT3BQ9UBC3 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
DNMT3BQ9UBC3 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.58■□□□□ 0.57
DNMT3BQ9UBC3 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
DNMT3BQ9UBC3 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
DNMT3BQ9UBC3 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
DNMT3BQ9UBC3 UPF3AP3-201ENST00000420996 769 ntBASIC18.58■□□□□ 0.56
DNMT3BQ9UBC3 AC009947.1-201ENST00000444350 727 ntBASIC18.58■□□□□ 0.56
DNMT3BQ9UBC3 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC18.58■□□□□ 0.56
DNMT3BQ9UBC3 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC18.58■□□□□ 0.56
DNMT3BQ9UBC3 AL139424.1-201ENST00000607572 797 ntBASIC18.58■□□□□ 0.56
DNMT3BQ9UBC3 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.58■□□□□ 0.56
DNMT3BQ9UBC3 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
DNMT3BQ9UBC3 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
DNMT3BQ9UBC3 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
DNMT3BQ9UBC3 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
DNMT3BQ9UBC3 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.58■□□□□ 0.56
DNMT3BQ9UBC3 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
DNMT3BQ9UBC3 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.58■□□□□ 0.56
DNMT3BQ9UBC3 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.57■□□□□ 0.56
DNMT3BQ9UBC3 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
DNMT3BQ9UBC3 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DNMT3BQ9UBC3 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
DNMT3BQ9UBC3 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DNMT3BQ9UBC3 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DNMT3BQ9UBC3 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.57■□□□□ 0.56
DNMT3BQ9UBC3 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.57■□□□□ 0.56
DNMT3BQ9UBC3 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
DNMT3BQ9UBC3 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.57■□□□□ 0.56
DNMT3BQ9UBC3 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
DNMT3BQ9UBC3 AC007967.2-201ENST00000432613 625 ntBASIC18.57■□□□□ 0.56
DNMT3BQ9UBC3 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.57■□□□□ 0.56
DNMT3BQ9UBC3 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC18.57■□□□□ 0.56
DNMT3BQ9UBC3 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.57■□□□□ 0.56
DNMT3BQ9UBC3 AL691403.2-201ENST00000618460 490 ntBASIC18.57■□□□□ 0.56
DNMT3BQ9UBC3 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
DNMT3BQ9UBC3 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC18.57■□□□□ 0.56
DNMT3BQ9UBC3 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
DNMT3BQ9UBC3 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.57■□□□□ 0.56
DNMT3BQ9UBC3 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.57■□□□□ 0.56
DNMT3BQ9UBC3 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.57■□□□□ 0.56
DNMT3BQ9UBC3 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.57■□□□□ 0.56
DNMT3BQ9UBC3 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.57■□□□□ 0.56
DNMT3BQ9UBC3 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DNMT3BQ9UBC3 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
DNMT3BQ9UBC3 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
DNMT3BQ9UBC3 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
DNMT3BQ9UBC3 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
DNMT3BQ9UBC3 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.56■□□□□ 0.56
DNMT3BQ9UBC3 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
DNMT3BQ9UBC3 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
DNMT3BQ9UBC3 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
DNMT3BQ9UBC3 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DNMT3BQ9UBC3 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DNMT3BQ9UBC3 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DNMT3BQ9UBC3 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
DNMT3BQ9UBC3 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
DNMT3BQ9UBC3 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
DNMT3BQ9UBC3 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.56■□□□□ 0.56
DNMT3BQ9UBC3 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
DNMT3BQ9UBC3 RPSAP43-201ENST00000402237 625 ntBASIC18.56■□□□□ 0.56
DNMT3BQ9UBC3 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.56■□□□□ 0.56
DNMT3BQ9UBC3 KRT18P27-201ENST00000427733 1299 ntBASIC18.56■□□□□ 0.56
DNMT3BQ9UBC3 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.56■□□□□ 0.56
DNMT3BQ9UBC3 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.56■□□□□ 0.56
DNMT3BQ9UBC3 PRYP5-201ENST00000451909 266 ntBASIC18.56■□□□□ 0.56
DNMT3BQ9UBC3 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.56■□□□□ 0.56
DNMT3BQ9UBC3 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC18.56■□□□□ 0.56
DNMT3BQ9UBC3 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DNMT3BQ9UBC3 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
DNMT3BQ9UBC3 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.56■□□□□ 0.56
DNMT3BQ9UBC3 AC010327.4-202ENST00000591484 748 ntBASIC18.56■□□□□ 0.56
DNMT3BQ9UBC3 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DNMT3BQ9UBC3 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
DNMT3BQ9UBC3 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
DNMT3BQ9UBC3 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.56■□□□□ 0.56
DNMT3BQ9UBC3 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
DNMT3BQ9UBC3 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
DNMT3BQ9UBC3 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DNMT3BQ9UBC3 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DNMT3BQ9UBC3 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
DNMT3BQ9UBC3 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
DNMT3BQ9UBC3 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
DNMT3BQ9UBC3 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
DNMT3BQ9UBC3 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
DNMT3BQ9UBC3 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.55■□□□□ 0.56
DNMT3BQ9UBC3 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
DNMT3BQ9UBC3 NEFHP1-201ENST00000412845 2629 ntBASIC18.55■□□□□ 0.56
DNMT3BQ9UBC3 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
DNMT3BQ9UBC3 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.55■□□□□ 0.56
DNMT3BQ9UBC3 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
DNMT3BQ9UBC3 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
DNMT3BQ9UBC3 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
DNMT3BQ9UBC3 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
DNMT3BQ9UBC3 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.55■□□□□ 0.56
DNMT3BQ9UBC3 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
DNMT3BQ9UBC3 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
DNMT3BQ9UBC3 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.55■□□□□ 0.56
DNMT3BQ9UBC3 COX5BP2-201ENST00000392354 334 ntBASIC18.55■□□□□ 0.56
DNMT3BQ9UBC3 AC073621.1-201ENST00000392730 636 ntBASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms