Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CUEDC1Q9NWM3 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.31■□□□□ 0.36
CUEDC1Q9NWM3 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CUEDC1Q9NWM3 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CUEDC1Q9NWM3 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CUEDC1Q9NWM3 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.31■□□□□ 0.36
CUEDC1Q9NWM3 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CUEDC1Q9NWM3 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.3■□□□□ 0.36
CUEDC1Q9NWM3 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.3■□□□□ 0.36
CUEDC1Q9NWM3 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CUEDC1Q9NWM3 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CUEDC1Q9NWM3 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CUEDC1Q9NWM3 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.3■□□□□ 0.36
CUEDC1Q9NWM3 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CUEDC1Q9NWM3 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CUEDC1Q9NWM3 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CUEDC1Q9NWM3 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CUEDC1Q9NWM3 CHCHD2P8-201ENST00000429873 447 ntBASIC17.3■□□□□ 0.36
CUEDC1Q9NWM3 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CUEDC1Q9NWM3 TSSC2-201ENST00000450217 709 ntBASIC17.3■□□□□ 0.36
CUEDC1Q9NWM3 AC068472.1-201ENST00000474589 881 ntBASIC17.3■□□□□ 0.36
CUEDC1Q9NWM3 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.3■□□□□ 0.36
CUEDC1Q9NWM3 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.3■□□□□ 0.36
CUEDC1Q9NWM3 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.3■□□□□ 0.36
CUEDC1Q9NWM3 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.3■□□□□ 0.36
CUEDC1Q9NWM3 RN7SL510P-201ENST00000581311 263 ntBASIC17.3■□□□□ 0.36
CUEDC1Q9NWM3 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CUEDC1Q9NWM3 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CUEDC1Q9NWM3 AC124864.1-201ENST00000623408 392 ntBASIC17.3■□□□□ 0.36
CUEDC1Q9NWM3 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.3■□□□□ 0.36
CUEDC1Q9NWM3 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CUEDC1Q9NWM3 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CUEDC1Q9NWM3 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CUEDC1Q9NWM3 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CUEDC1Q9NWM3 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CUEDC1Q9NWM3 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CUEDC1Q9NWM3 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CUEDC1Q9NWM3 AL133373.2-201ENST00000623187 2828 ntBASIC17.29■□□□□ 0.36
CUEDC1Q9NWM3 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CUEDC1Q9NWM3 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CUEDC1Q9NWM3 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CUEDC1Q9NWM3 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CUEDC1Q9NWM3 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CUEDC1Q9NWM3 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.29■□□□□ 0.36
CUEDC1Q9NWM3 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.29■□□□□ 0.36
CUEDC1Q9NWM3 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CUEDC1Q9NWM3 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CUEDC1Q9NWM3 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CUEDC1Q9NWM3 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.29■□□□□ 0.36
CUEDC1Q9NWM3 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CUEDC1Q9NWM3 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CUEDC1Q9NWM3 AP002383.4-201ENST00000442518 975 ntBASIC17.29■□□□□ 0.36
CUEDC1Q9NWM3 KRT17P6-201ENST00000453795 1220 ntBASIC17.29■□□□□ 0.36
CUEDC1Q9NWM3 RN7SL606P-201ENST00000472779 293 ntBASIC17.29■□□□□ 0.36
CUEDC1Q9NWM3 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.29■□□□□ 0.36
CUEDC1Q9NWM3 GUSBP12-201ENST00000513727 720 ntBASIC17.29■□□□□ 0.36
CUEDC1Q9NWM3 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.29■□□□□ 0.36
CUEDC1Q9NWM3 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.29■□□□□ 0.36
CUEDC1Q9NWM3 IGHV3-41-201ENST00000613121 348 ntBASIC17.29■□□□□ 0.36
CUEDC1Q9NWM3 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.29■□□□□ 0.36
CUEDC1Q9NWM3 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.29■□□□□ 0.36
CUEDC1Q9NWM3 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CUEDC1Q9NWM3 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CUEDC1Q9NWM3 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
CUEDC1Q9NWM3 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CUEDC1Q9NWM3 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
CUEDC1Q9NWM3 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CUEDC1Q9NWM3 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CUEDC1Q9NWM3 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CUEDC1Q9NWM3 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CUEDC1Q9NWM3 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CUEDC1Q9NWM3 LTB4R2-202ENST00000528054 3092 ntBASIC17.29■□□□□ 0.36
CUEDC1Q9NWM3 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.29■□□□□ 0.36
CUEDC1Q9NWM3 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CUEDC1Q9NWM3 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CUEDC1Q9NWM3 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CUEDC1Q9NWM3 KRT8P47-201ENST00000604727 1398 ntBASIC17.28■□□□□ 0.36
CUEDC1Q9NWM3 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CUEDC1Q9NWM3 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CUEDC1Q9NWM3 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CUEDC1Q9NWM3 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CUEDC1Q9NWM3 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CUEDC1Q9NWM3 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CUEDC1Q9NWM3 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CUEDC1Q9NWM3 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CUEDC1Q9NWM3 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
CUEDC1Q9NWM3 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CUEDC1Q9NWM3 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CUEDC1Q9NWM3 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CUEDC1Q9NWM3 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.28■□□□□ 0.36
CUEDC1Q9NWM3 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.28■□□□□ 0.36
CUEDC1Q9NWM3 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.28■□□□□ 0.36
CUEDC1Q9NWM3 MTCL1P1-201ENST00000446207 792 ntBASIC17.28■□□□□ 0.36
CUEDC1Q9NWM3 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CUEDC1Q9NWM3 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CUEDC1Q9NWM3 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.28■□□□□ 0.36
CUEDC1Q9NWM3 PRELID1P1-202ENST00000567272 903 ntBASIC17.28■□□□□ 0.36
CUEDC1Q9NWM3 MIR3652-201ENST00000579335 131 ntBASIC17.28■□□□□ 0.36
CUEDC1Q9NWM3 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CUEDC1Q9NWM3 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms