Protein–RNA interactions for Protein: Q9NWD8

TMEM248, Transmembrane protein 248, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248Q9NWD8 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TMEM248Q9NWD8 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TMEM248Q9NWD8 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.25■□□□□ 0.51
TMEM248Q9NWD8 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TMEM248Q9NWD8 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TMEM248Q9NWD8 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.24■□□□□ 0.51
TMEM248Q9NWD8 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.24■□□□□ 0.51
TMEM248Q9NWD8 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TMEM248Q9NWD8 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.24■□□□□ 0.51
TMEM248Q9NWD8 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TMEM248Q9NWD8 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.24■□□□□ 0.51
TMEM248Q9NWD8 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
TMEM248Q9NWD8 BX276092.7-203ENST00000637198 1536 ntBASIC18.24■□□□□ 0.51
TMEM248Q9NWD8 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TMEM248Q9NWD8 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
TMEM248Q9NWD8 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.24■□□□□ 0.51
TMEM248Q9NWD8 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TMEM248Q9NWD8 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TMEM248Q9NWD8 COX5BP2-201ENST00000392354 334 ntBASIC18.24■□□□□ 0.51
TMEM248Q9NWD8 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.24■□□□□ 0.51
TMEM248Q9NWD8 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.24■□□□□ 0.51
TMEM248Q9NWD8 AC096582.2-201ENST00000510860 516 ntBASIC18.24■□□□□ 0.51
TMEM248Q9NWD8 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TMEM248Q9NWD8 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.24■□□□□ 0.51
TMEM248Q9NWD8 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.24■□□□□ 0.51
TMEM248Q9NWD8 AC114341.1-201ENST00000618070 349 ntBASIC18.24■□□□□ 0.51
TMEM248Q9NWD8 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TMEM248Q9NWD8 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
TMEM248Q9NWD8 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TMEM248Q9NWD8 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.24■□□□□ 0.51
TMEM248Q9NWD8 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.24■□□□□ 0.51
TMEM248Q9NWD8 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
TMEM248Q9NWD8 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.24■□□□□ 0.51
TMEM248Q9NWD8 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.24■□□□□ 0.51
TMEM248Q9NWD8 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
TMEM248Q9NWD8 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TMEM248Q9NWD8 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TMEM248Q9NWD8 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TMEM248Q9NWD8 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM248Q9NWD8 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
TMEM248Q9NWD8 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM248Q9NWD8 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.23■□□□□ 0.51
TMEM248Q9NWD8 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
TMEM248Q9NWD8 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM248Q9NWD8 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM248Q9NWD8 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.23■□□□□ 0.51
TMEM248Q9NWD8 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.23■□□□□ 0.51
TMEM248Q9NWD8 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM248Q9NWD8 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM248Q9NWD8 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM248Q9NWD8 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.23■□□□□ 0.51
TMEM248Q9NWD8 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.23■□□□□ 0.51
TMEM248Q9NWD8 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.23■□□□□ 0.51
TMEM248Q9NWD8 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.23■□□□□ 0.51
TMEM248Q9NWD8 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
TMEM248Q9NWD8 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM248Q9NWD8 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM248Q9NWD8 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.23■□□□□ 0.51
TMEM248Q9NWD8 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM248Q9NWD8 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM248Q9NWD8 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.23■□□□□ 0.51
TMEM248Q9NWD8 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM248Q9NWD8 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TMEM248Q9NWD8 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.22■□□□□ 0.51
TMEM248Q9NWD8 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
TMEM248Q9NWD8 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TMEM248Q9NWD8 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TMEM248Q9NWD8 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.22■□□□□ 0.51
TMEM248Q9NWD8 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.22■□□□□ 0.51
TMEM248Q9NWD8 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TMEM248Q9NWD8 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.22■□□□□ 0.51
TMEM248Q9NWD8 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.22■□□□□ 0.51
TMEM248Q9NWD8 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.22■□□□□ 0.51
TMEM248Q9NWD8 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TMEM248Q9NWD8 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.22■□□□□ 0.51
TMEM248Q9NWD8 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TMEM248Q9NWD8 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.22■□□□□ 0.51
TMEM248Q9NWD8 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
TMEM248Q9NWD8 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TMEM248Q9NWD8 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TMEM248Q9NWD8 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TMEM248Q9NWD8 FAM220CP-201ENST00000395253 831 ntBASIC18.22■□□□□ 0.51
TMEM248Q9NWD8 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TMEM248Q9NWD8 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.22■□□□□ 0.51
TMEM248Q9NWD8 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.22■□□□□ 0.51
TMEM248Q9NWD8 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.22■□□□□ 0.51
TMEM248Q9NWD8 AC122714.2-201ENST00000502787 707 ntBASIC18.22■□□□□ 0.51
TMEM248Q9NWD8 FOSL1P1-201ENST00000511041 816 ntBASIC18.22■□□□□ 0.51
TMEM248Q9NWD8 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.22■□□□□ 0.51
TMEM248Q9NWD8 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.22■□□□□ 0.51
TMEM248Q9NWD8 PRELID1P1-202ENST00000567272 903 ntBASIC18.22■□□□□ 0.51
TMEM248Q9NWD8 AC138894.3-201ENST00000603787 634 ntBASIC18.22■□□□□ 0.51
TMEM248Q9NWD8 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TMEM248Q9NWD8 AC012317.2-201ENST00000623305 2251 ntBASIC18.22■□□□□ 0.51
TMEM248Q9NWD8 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.22■□□□□ 0.51
TMEM248Q9NWD8 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TMEM248Q9NWD8 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.22■□□□□ 0.51
TMEM248Q9NWD8 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TMEM248Q9NWD8 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
TMEM248Q9NWD8 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms