Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 OR6D1P-203ENST00000641209 4860 ntBASIC16.67■□□□□ 0.26
CTPS2Q9NRF8 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CTPS2Q9NRF8 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CTPS2Q9NRF8 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CTPS2Q9NRF8 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CTPS2Q9NRF8 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CTPS2Q9NRF8 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CTPS2Q9NRF8 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CTPS2Q9NRF8 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CTPS2Q9NRF8 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.67■□□□□ 0.26
CTPS2Q9NRF8 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.67■□□□□ 0.26
CTPS2Q9NRF8 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
CTPS2Q9NRF8 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CTPS2Q9NRF8 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CTPS2Q9NRF8 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CTPS2Q9NRF8 GCSHP2-201ENST00000560971 527 ntBASIC16.67■□□□□ 0.26
CTPS2Q9NRF8 AC009065.1-201ENST00000564055 1225 ntBASIC16.67■□□□□ 0.26
CTPS2Q9NRF8 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.67■□□□□ 0.26
CTPS2Q9NRF8 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
CTPS2Q9NRF8 AC140113.3-201ENST00000605663 199 ntBASIC16.67■□□□□ 0.26
CTPS2Q9NRF8 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.67■□□□□ 0.26
CTPS2Q9NRF8 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CTPS2Q9NRF8 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CTPS2Q9NRF8 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.67■□□□□ 0.26
CTPS2Q9NRF8 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CTPS2Q9NRF8 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.67■□□□□ 0.26
CTPS2Q9NRF8 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.67■□□□□ 0.26
CTPS2Q9NRF8 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CTPS2Q9NRF8 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CTPS2Q9NRF8 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.67■□□□□ 0.26
CTPS2Q9NRF8 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CTPS2Q9NRF8 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CTPS2Q9NRF8 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CTPS2Q9NRF8 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CTPS2Q9NRF8 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CTPS2Q9NRF8 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CTPS2Q9NRF8 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CTPS2Q9NRF8 PP12613-201ENST00000424958 2230 ntBASIC16.66■□□□□ 0.26
CTPS2Q9NRF8 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
CTPS2Q9NRF8 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.66■□□□□ 0.26
CTPS2Q9NRF8 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CTPS2Q9NRF8 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CTPS2Q9NRF8 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.66■□□□□ 0.26
CTPS2Q9NRF8 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CTPS2Q9NRF8 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CTPS2Q9NRF8 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CTPS2Q9NRF8 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CTPS2Q9NRF8 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CTPS2Q9NRF8 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CTPS2Q9NRF8 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CTPS2Q9NRF8 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CTPS2Q9NRF8 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CTPS2Q9NRF8 COX11P1-201ENST00000489116 835 ntBASIC16.66■□□□□ 0.26
CTPS2Q9NRF8 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.66■□□□□ 0.26
CTPS2Q9NRF8 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.66■□□□□ 0.26
CTPS2Q9NRF8 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CTPS2Q9NRF8 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.66■□□□□ 0.26
CTPS2Q9NRF8 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.66■□□□□ 0.26
CTPS2Q9NRF8 ARL16-209ENST00000573715 763 ntTSL 3 BASIC16.66■□□□□ 0.26
CTPS2Q9NRF8 ARL16-211ENST00000576135 694 ntTSL 3 BASIC16.66■□□□□ 0.26
CTPS2Q9NRF8 MIR3180-4-201ENST00000582223 153 ntBASIC16.66■□□□□ 0.26
CTPS2Q9NRF8 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.66■□□□□ 0.26
CTPS2Q9NRF8 AC092865.7-201ENST00000641832 219 ntBASIC16.66■□□□□ 0.26
CTPS2Q9NRF8 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CTPS2Q9NRF8 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CTPS2Q9NRF8 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CTPS2Q9NRF8 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CTPS2Q9NRF8 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CTPS2Q9NRF8 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CTPS2Q9NRF8 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CTPS2Q9NRF8 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CTPS2Q9NRF8 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CTPS2Q9NRF8 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CTPS2Q9NRF8 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CTPS2Q9NRF8 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CTPS2Q9NRF8 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.65■□□□□ 0.26
CTPS2Q9NRF8 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.65■□□□□ 0.26
CTPS2Q9NRF8 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.65■□□□□ 0.26
CTPS2Q9NRF8 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTPS2Q9NRF8 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTPS2Q9NRF8 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.65■□□□□ 0.26
CTPS2Q9NRF8 BX664615.1-201ENST00000443558 458 ntBASIC16.65■□□□□ 0.26
CTPS2Q9NRF8 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.65■□□□□ 0.26
CTPS2Q9NRF8 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
CTPS2Q9NRF8 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.65■□□□□ 0.26
CTPS2Q9NRF8 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.65■□□□□ 0.26
CTPS2Q9NRF8 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.65■□□□□ 0.26
CTPS2Q9NRF8 MIR3917-201ENST00000580971 93 ntBASIC16.65■□□□□ 0.26
CTPS2Q9NRF8 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.65■□□□□ 0.26
CTPS2Q9NRF8 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CTPS2Q9NRF8 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTPS2Q9NRF8 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTPS2Q9NRF8 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTPS2Q9NRF8 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CTPS2Q9NRF8 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTPS2Q9NRF8 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CTPS2Q9NRF8 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CTPS2Q9NRF8 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
CTPS2Q9NRF8 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTPS2Q9NRF8 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms