Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC16.3■□□□□ 0.2
HMG20AQ9NP66 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HMG20AQ9NP66 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.29■□□□□ 0.2
HMG20AQ9NP66 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.29■□□□□ 0.2
HMG20AQ9NP66 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HMG20AQ9NP66 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HMG20AQ9NP66 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HMG20AQ9NP66 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HMG20AQ9NP66 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
HMG20AQ9NP66 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HMG20AQ9NP66 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
HMG20AQ9NP66 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.29■□□□□ 0.2
HMG20AQ9NP66 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HMG20AQ9NP66 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.29■□□□□ 0.2
HMG20AQ9NP66 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HMG20AQ9NP66 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HMG20AQ9NP66 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
HMG20AQ9NP66 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HMG20AQ9NP66 AGGF1P2-201ENST00000426656 2106 ntBASIC16.29■□□□□ 0.2
HMG20AQ9NP66 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HMG20AQ9NP66 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC16.29■□□□□ 0.2
HMG20AQ9NP66 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC16.29■□□□□ 0.2
HMG20AQ9NP66 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HMG20AQ9NP66 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HMG20AQ9NP66 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC16.29■□□□□ 0.2
HMG20AQ9NP66 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HMG20AQ9NP66 Six3os1_6.1-201ENST00000620790 196 ntBASIC16.29■□□□□ 0.2
HMG20AQ9NP66 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HMG20AQ9NP66 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.29■□□□□ 0.2
HMG20AQ9NP66 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HMG20AQ9NP66 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HMG20AQ9NP66 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.29■□□□□ 0.2
HMG20AQ9NP66 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HMG20AQ9NP66 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HMG20AQ9NP66 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HMG20AQ9NP66 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HMG20AQ9NP66 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HMG20AQ9NP66 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
HMG20AQ9NP66 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HMG20AQ9NP66 TSPY26P-202ENST00000565928 3884 ntBASIC16.29■□□□□ 0.2
HMG20AQ9NP66 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HMG20AQ9NP66 LINC00554-201ENST00000564841 3011 ntBASIC16.29■□□□□ 0.2
HMG20AQ9NP66 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC16.29■□□□□ 0.2
HMG20AQ9NP66 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HMG20AQ9NP66 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HMG20AQ9NP66 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HMG20AQ9NP66 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
HMG20AQ9NP66 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HMG20AQ9NP66 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HMG20AQ9NP66 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
HMG20AQ9NP66 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HMG20AQ9NP66 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HMG20AQ9NP66 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HMG20AQ9NP66 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HMG20AQ9NP66 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HMG20AQ9NP66 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
HMG20AQ9NP66 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HMG20AQ9NP66 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.28■□□□□ 0.2
HMG20AQ9NP66 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC16.28■□□□□ 0.2
HMG20AQ9NP66 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HMG20AQ9NP66 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
HMG20AQ9NP66 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC16.28■□□□□ 0.2
HMG20AQ9NP66 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HMG20AQ9NP66 KRT17P3-201ENST00000420566 1262 ntBASIC16.28■□□□□ 0.2
HMG20AQ9NP66 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC16.28■□□□□ 0.2
HMG20AQ9NP66 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC16.28■□□□□ 0.2
HMG20AQ9NP66 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
HMG20AQ9NP66 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC16.28■□□□□ 0.2
HMG20AQ9NP66 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC16.28■□□□□ 0.2
HMG20AQ9NP66 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HMG20AQ9NP66 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC16.28■□□□□ 0.2
HMG20AQ9NP66 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HMG20AQ9NP66 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
HMG20AQ9NP66 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
HMG20AQ9NP66 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
HMG20AQ9NP66 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
HMG20AQ9NP66 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
HMG20AQ9NP66 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
HMG20AQ9NP66 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HMG20AQ9NP66 NBPF21P-201ENST00000425093 1451 ntBASIC16.28■□□□□ 0.2
HMG20AQ9NP66 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC16.28■□□□□ 0.2
HMG20AQ9NP66 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HMG20AQ9NP66 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HMG20AQ9NP66 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HMG20AQ9NP66 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HMG20AQ9NP66 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.28■□□□□ 0.2
HMG20AQ9NP66 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
HMG20AQ9NP66 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HMG20AQ9NP66 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HMG20AQ9NP66 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
HMG20AQ9NP66 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
HMG20AQ9NP66 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HMG20AQ9NP66 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.27■□□□□ 0.2
HMG20AQ9NP66 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMG20AQ9NP66 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
HMG20AQ9NP66 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.27■□□□□ 0.2
HMG20AQ9NP66 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMG20AQ9NP66 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMG20AQ9NP66 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMG20AQ9NP66 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms